FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623966_s_at:

>probe:Drosophila_2:1623966_s_at:623:643; Interrogation_Position=3744; Antisense; TCATAAACATTTACTTGGGCTTGGA
>probe:Drosophila_2:1623966_s_at:549:591; Interrogation_Position=3759; Antisense; TGGGCTTGGAAATGTCAGACTCGTT
>probe:Drosophila_2:1623966_s_at:410:405; Interrogation_Position=3776; Antisense; GACTCGTTGCAAGTCTGAGATCGAA
>probe:Drosophila_2:1623966_s_at:91:425; Interrogation_Position=3792; Antisense; GAGATCGAAGGACTTTTCCAAAAGT
>probe:Drosophila_2:1623966_s_at:501:467; Interrogation_Position=3824; Antisense; GTTGCAAACATTTCGAGACTGTCAG
>probe:Drosophila_2:1623966_s_at:200:105; Interrogation_Position=3859; Antisense; AGACATCTATTTAAACATTCGTTCA
>probe:Drosophila_2:1623966_s_at:184:637; Interrogation_Position=3877; Antisense; TCGTTCATTTCCACATTTCATTTAG
>probe:Drosophila_2:1623966_s_at:95:381; Interrogation_Position=3991; Antisense; GAACCAACATTTTCTATTGCTTTAT
>probe:Drosophila_2:1623966_s_at:391:29; Interrogation_Position=4014; Antisense; ATACAAGACTTATCCACAACAGACT
>probe:Drosophila_2:1623966_s_at:352:257; Interrogation_Position=4028; Antisense; CACAACAGACTTTGAGCATTCACAA
>probe:Drosophila_2:1623966_s_at:3:263; Interrogation_Position=4110; Antisense; CAGATTAATCTTGTACGCGAACCTT
>probe:Drosophila_2:1623966_s_at:408:13; Interrogation_Position=4117; Antisense; ATCTTGTACGCGAACCTTAAGGTTG
>probe:Drosophila_2:1623966_s_at:157:173; Interrogation_Position=4197; Antisense; AAAGCTCGTTTATATCAGTAGTCAC
>probe:Drosophila_2:1623966_s_at:394:35; Interrogation_Position=4210; Antisense; ATCAGTAGTCACATATTTCACAGAA

Paste this into a BLAST search page for me
TCATAAACATTTACTTGGGCTTGGATGGGCTTGGAAATGTCAGACTCGTTGACTCGTTGCAAGTCTGAGATCGAAGAGATCGAAGGACTTTTCCAAAAGTGTTGCAAACATTTCGAGACTGTCAGAGACATCTATTTAAACATTCGTTCATCGTTCATTTCCACATTTCATTTAGGAACCAACATTTTCTATTGCTTTATATACAAGACTTATCCACAACAGACTCACAACAGACTTTGAGCATTCACAACAGATTAATCTTGTACGCGAACCTTATCTTGTACGCGAACCTTAAGGTTGAAAGCTCGTTTATATCAGTAGTCACATCAGTAGTCACATATTTCACAGAA

Full Affymetrix probeset data:

Annotations for 1623966_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720