FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1623972_a_at:

>probe:Drosophila_2:1623972_a_at:210:709; Interrogation_Position=2998; Antisense; TTCGAATCGTCAGCGCTAATTTCTC
>probe:Drosophila_2:1623972_a_at:705:653; Interrogation_Position=3037; Antisense; TAATGTTGAACCCTTATGATACTTT
>probe:Drosophila_2:1623972_a_at:81:59; Interrogation_Position=3052; Antisense; ATGATACTTTCATTTGCCCACTCTA
>probe:Drosophila_2:1623972_a_at:667:19; Interrogation_Position=3063; Antisense; ATTTGCCCACTCTAACATGTATATT
>probe:Drosophila_2:1623972_a_at:88:605; Interrogation_Position=3113; Antisense; TGATTGGTGCGTCGTAGATCCCTAC
>probe:Drosophila_2:1623972_a_at:370:381; Interrogation_Position=3164; Antisense; GAACCGCTGAGGAGTGTATACATTT
>probe:Drosophila_2:1623972_a_at:187:663; Interrogation_Position=3190; Antisense; TAAAGAATGTCCTCAATCCCCAAAT
>probe:Drosophila_2:1623972_a_at:62:53; Interrogation_Position=3213; Antisense; ATGCATCTGTGATTCATAAACGACG
>probe:Drosophila_2:1623972_a_at:411:661; Interrogation_Position=3229; Antisense; TAAACGACGAGCAGCGCAGTCTTTT
>probe:Drosophila_2:1623972_a_at:717:349; Interrogation_Position=3244; Antisense; GCAGTCTTTTGAGCCCGAAGCAATT
>probe:Drosophila_2:1623972_a_at:194:535; Interrogation_Position=3373; Antisense; GGTCCATTGGCGCTAGGAACCTCTT
>probe:Drosophila_2:1623972_a_at:399:339; Interrogation_Position=3384; Antisense; GCTAGGAACCTCTTTTGCATATAAC
>probe:Drosophila_2:1623972_a_at:444:167; Interrogation_Position=3473; Antisense; AAATGAGTTCTTGTAGCGTTGTAAA
>probe:Drosophila_2:1623972_a_at:341:375; Interrogation_Position=3510; Antisense; GAAGCACGTTCTACCTTTAACTAAT

Paste this into a BLAST search page for me
TTCGAATCGTCAGCGCTAATTTCTCTAATGTTGAACCCTTATGATACTTTATGATACTTTCATTTGCCCACTCTAATTTGCCCACTCTAACATGTATATTTGATTGGTGCGTCGTAGATCCCTACGAACCGCTGAGGAGTGTATACATTTTAAAGAATGTCCTCAATCCCCAAATATGCATCTGTGATTCATAAACGACGTAAACGACGAGCAGCGCAGTCTTTTGCAGTCTTTTGAGCCCGAAGCAATTGGTCCATTGGCGCTAGGAACCTCTTGCTAGGAACCTCTTTTGCATATAACAAATGAGTTCTTGTAGCGTTGTAAAGAAGCACGTTCTACCTTTAACTAAT

Full Affymetrix probeset data:

Annotations for 1623972_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720