FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624004_s_at:

>probe:Drosophila_2:1624004_s_at:440:613; Interrogation_Position=5417; Antisense; TGAACTTGACGCCTCCATAGATTTG
>probe:Drosophila_2:1624004_s_at:248:25; Interrogation_Position=5433; Antisense; ATAGATTTGGCCACGCAAGCGATTG
>probe:Drosophila_2:1624004_s_at:601:263; Interrogation_Position=5460; Antisense; CAGAAGCCGCACAGCTACGAAGGAT
>probe:Drosophila_2:1624004_s_at:174:671; Interrogation_Position=5475; Antisense; TACGAAGGATACTACGCCAGGGCAA
>probe:Drosophila_2:1624004_s_at:650:227; Interrogation_Position=5499; Antisense; AAGGCGCGCATGGAACTTGGTGCAT
>probe:Drosophila_2:1624004_s_at:257:365; Interrogation_Position=5525; Antisense; GAATGAAGCACTTGTGGACGCCAAT
>probe:Drosophila_2:1624004_s_at:515:321; Interrogation_Position=5568; Antisense; GCCCAAAGCGGTGTGCTCTGCGAAG
>probe:Drosophila_2:1624004_s_at:477:35; Interrogation_Position=5643; Antisense; ATCAGCAGCGAGGATCAGACCGGCA
>probe:Drosophila_2:1624004_s_at:220:45; Interrogation_Position=5693; Antisense; ATCCGTCGCATACGAATCTCATCAT
>probe:Drosophila_2:1624004_s_at:118:3; Interrogation_Position=5752; Antisense; ATTGTTGTACTCGTCGTATACCCTT
>probe:Drosophila_2:1624004_s_at:260:277; Interrogation_Position=5794; Antisense; CTACTTAAGAGCTACCCTAGACCTT
>probe:Drosophila_2:1624004_s_at:112:691; Interrogation_Position=5823; Antisense; TTTGCTATTTATTGCCTTCGAATGT
>probe:Drosophila_2:1624004_s_at:274:715; Interrogation_Position=5896; Antisense; TTCTTTTTAATTGTGTCTGCGCATG
>probe:Drosophila_2:1624004_s_at:15:347; Interrogation_Position=5948; Antisense; GCATAGGCATCAGTTCTTATCCATA

Paste this into a BLAST search page for me
TGAACTTGACGCCTCCATAGATTTGATAGATTTGGCCACGCAAGCGATTGCAGAAGCCGCACAGCTACGAAGGATTACGAAGGATACTACGCCAGGGCAAAAGGCGCGCATGGAACTTGGTGCATGAATGAAGCACTTGTGGACGCCAATGCCCAAAGCGGTGTGCTCTGCGAAGATCAGCAGCGAGGATCAGACCGGCAATCCGTCGCATACGAATCTCATCATATTGTTGTACTCGTCGTATACCCTTCTACTTAAGAGCTACCCTAGACCTTTTTGCTATTTATTGCCTTCGAATGTTTCTTTTTAATTGTGTCTGCGCATGGCATAGGCATCAGTTCTTATCCATA

Full Affymetrix probeset data:

Annotations for 1624004_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720