FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624021_a_at:

>probe:Drosophila_2:1624021_a_at:496:487; Interrogation_Position=4240; Antisense; GTAGCTGACTACGAATAATGACGAC
>probe:Drosophila_2:1624021_a_at:155:57; Interrogation_Position=4257; Antisense; ATGACGACGATGACGGGACGCAGAT
>probe:Drosophila_2:1624021_a_at:561:51; Interrogation_Position=4310; Antisense; ATGCGATTGCGAACGGTTGCGGATC
>probe:Drosophila_2:1624021_a_at:710:287; Interrogation_Position=4323; Antisense; CGGTTGCGGATCTAGCGGAAAGTCA
>probe:Drosophila_2:1624021_a_at:108:611; Interrogation_Position=4353; Antisense; TGACGATAACGATTTACGATTACGA
>probe:Drosophila_2:1624021_a_at:295:197; Interrogation_Position=4442; Antisense; AACGTTGGTGCATTTGTTGTTAGAT
>probe:Drosophila_2:1624021_a_at:439:601; Interrogation_Position=4466; Antisense; TGTATGTAATTTTTCCCACTCGCCT
>probe:Drosophila_2:1624021_a_at:591:143; Interrogation_Position=4483; Antisense; ACTCGCCTTTGCCTAAAAGCAACAC
>probe:Drosophila_2:1624021_a_at:474:469; Interrogation_Position=4568; Antisense; GTTGCATATAGAACCACGGAAATTC
>probe:Drosophila_2:1624021_a_at:477:395; Interrogation_Position=4586; Antisense; GAAATTCATTCACACAACCACTTAC
>probe:Drosophila_2:1624021_a_at:633:687; Interrogation_Position=4616; Antisense; TATATCTGTACCATTTAGCCCATAG
>probe:Drosophila_2:1624021_a_at:183:707; Interrogation_Position=4630; Antisense; TTAGCCCATAGTCCGCAGAAGATCG
>probe:Drosophila_2:1624021_a_at:22:373; Interrogation_Position=4647; Antisense; GAAGATCGTCGAAACAAAGTCATTT
>probe:Drosophila_2:1624021_a_at:597:453; Interrogation_Position=4749; Antisense; GTTGTCGCGTTGATTTAAACCTATA

Paste this into a BLAST search page for me
GTAGCTGACTACGAATAATGACGACATGACGACGATGACGGGACGCAGATATGCGATTGCGAACGGTTGCGGATCCGGTTGCGGATCTAGCGGAAAGTCATGACGATAACGATTTACGATTACGAAACGTTGGTGCATTTGTTGTTAGATTGTATGTAATTTTTCCCACTCGCCTACTCGCCTTTGCCTAAAAGCAACACGTTGCATATAGAACCACGGAAATTCGAAATTCATTCACACAACCACTTACTATATCTGTACCATTTAGCCCATAGTTAGCCCATAGTCCGCAGAAGATCGGAAGATCGTCGAAACAAAGTCATTTGTTGTCGCGTTGATTTAAACCTATA

Full Affymetrix probeset data:

Annotations for 1624021_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720