FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624099_at:

>probe:Drosophila_2:1624099_at:650:681; Interrogation_Position=118; Antisense; TATGATGTCTACTCCATATCGGATA
>probe:Drosophila_2:1624099_at:368:587; Interrogation_Position=14; Antisense; TGGAGCCACCTAATGGAGGATCTGA
>probe:Drosophila_2:1624099_at:13:131; Interrogation_Position=151; Antisense; ACCGAACTGCGATCCTGGTTTGGAA
>probe:Drosophila_2:1624099_at:370:173; Interrogation_Position=180; Antisense; AAAGCAACTGCACAATCCGGCAACG
>probe:Drosophila_2:1624099_at:102:567; Interrogation_Position=198; Antisense; GGCAACGCTCAACACTCTGAAAATG
>probe:Drosophila_2:1624099_at:50:437; Interrogation_Position=29; Antisense; GAGGATCTGAACTCGTGGCTGCCAC
>probe:Drosophila_2:1624099_at:157:389; Interrogation_Position=304; Antisense; GAAAACTTCATCAAGCTGCCGAGCT
>probe:Drosophila_2:1624099_at:130:337; Interrogation_Position=318; Antisense; GCTGCCGAGCTTTAAAATGCCGAAC
>probe:Drosophila_2:1624099_at:98:625; Interrogation_Position=335; Antisense; TGCCGAACATCACAATTGTCATCGT
>probe:Drosophila_2:1624099_at:232:105; Interrogation_Position=363; Antisense; AGACGAGTTGTCCAAGATTGCGAGA
>probe:Drosophila_2:1624099_at:474:521; Interrogation_Position=43; Antisense; GTGGCTGCCACGGAGCGATATTTAT
>probe:Drosophila_2:1624099_at:260:459; Interrogation_Position=59; Antisense; GATATTTATCGCCTCAGATTGAGTT
>probe:Drosophila_2:1624099_at:647:607; Interrogation_Position=78; Antisense; TGAGTTGGATCCACGGTGTCCTATA
>probe:Drosophila_2:1624099_at:226:517; Interrogation_Position=93; Antisense; GTGTCCTATAATCTTCCTGTTTCAA

Paste this into a BLAST search page for me
TATGATGTCTACTCCATATCGGATATGGAGCCACCTAATGGAGGATCTGAACCGAACTGCGATCCTGGTTTGGAAAAAGCAACTGCACAATCCGGCAACGGGCAACGCTCAACACTCTGAAAATGGAGGATCTGAACTCGTGGCTGCCACGAAAACTTCATCAAGCTGCCGAGCTGCTGCCGAGCTTTAAAATGCCGAACTGCCGAACATCACAATTGTCATCGTAGACGAGTTGTCCAAGATTGCGAGAGTGGCTGCCACGGAGCGATATTTATGATATTTATCGCCTCAGATTGAGTTTGAGTTGGATCCACGGTGTCCTATAGTGTCCTATAATCTTCCTGTTTCAA

Full Affymetrix probeset data:

Annotations for 1624099_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720