FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624246_s_at:

>probe:Drosophila_2:1624246_s_at:144:3; Interrogation_Position=1039; Antisense; ATTGGTACCTACCAGATTGCCGTGG
>probe:Drosophila_2:1624246_s_at:389:137; Interrogation_Position=1076; Antisense; ACGACGTGCCATTTTACGTAGCCGC
>probe:Drosophila_2:1624246_s_at:373:673; Interrogation_Position=1121; Antisense; TAGCGATTCCCGGAGGCGATCACAT
>probe:Drosophila_2:1624246_s_at:386:151; Interrogation_Position=1142; Antisense; ACATCATCATTGAGGAGCGTCCCGA
>probe:Drosophila_2:1624246_s_at:603:625; Interrogation_Position=1203; Antisense; TGCCCCGGGCATTAACTGCTGGAAC
>probe:Drosophila_2:1624246_s_at:274:37; Interrogation_Position=1267; Antisense; ATCATCACGGAACGCGGTGTCTTCA
>probe:Drosophila_2:1624246_s_at:181:385; Interrogation_Position=1305; Antisense; GAAAGAGGCCATCACTAAGTTGCTA
>probe:Drosophila_2:1624246_s_at:33:217; Interrogation_Position=1321; Antisense; AAGTTGCTAGAGTCCTAACCGGCGC
>probe:Drosophila_2:1624246_s_at:388:485; Interrogation_Position=1352; Antisense; GTAGTTTACACATGCACTCCATACC
>probe:Drosophila_2:1624246_s_at:560:133; Interrogation_Position=1407; Antisense; ACGCGCGCTCGGAATAGGCATTTTG
>probe:Drosophila_2:1624246_s_at:617:569; Interrogation_Position=1423; Antisense; GGCATTTTGCCAGCTGAGTTTTGTA
>probe:Drosophila_2:1624246_s_at:32:699; Interrogation_Position=1443; Antisense; TTGTATACAAACGTTTTCCCGCCTG
>probe:Drosophila_2:1624246_s_at:517:299; Interrogation_Position=927; Antisense; CGCCACTCTGGTTCTGGATAGCATG
>probe:Drosophila_2:1624246_s_at:495:419; Interrogation_Position=998; Antisense; GAGCAGATCGTGTGGCCTCCAATGG

Paste this into a BLAST search page for me
ATTGGTACCTACCAGATTGCCGTGGACGACGTGCCATTTTACGTAGCCGCTAGCGATTCCCGGAGGCGATCACATACATCATCATTGAGGAGCGTCCCGATGCCCCGGGCATTAACTGCTGGAACATCATCACGGAACGCGGTGTCTTCAGAAAGAGGCCATCACTAAGTTGCTAAAGTTGCTAGAGTCCTAACCGGCGCGTAGTTTACACATGCACTCCATACCACGCGCGCTCGGAATAGGCATTTTGGGCATTTTGCCAGCTGAGTTTTGTATTGTATACAAACGTTTTCCCGCCTGCGCCACTCTGGTTCTGGATAGCATGGAGCAGATCGTGTGGCCTCCAATGG

Full Affymetrix probeset data:

Annotations for 1624246_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720