FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624261_at:

>probe:Drosophila_2:1624261_at:50:367; Interrogation_Position=1097; Antisense; GAATCGCTTTGGTGGGTGTGAATAA
>probe:Drosophila_2:1624261_at:659:431; Interrogation_Position=1150; Antisense; GAGTCCTATATCATCTGCGATCCAG
>probe:Drosophila_2:1624261_at:599:267; Interrogation_Position=1189; Antisense; CAGTGGCTTAGCTGGCTGCACAAAA
>probe:Drosophila_2:1624261_at:264:41; Interrogation_Position=1244; Antisense; ATCTGTATGCCTGTTCGGTGGCGAA
>probe:Drosophila_2:1624261_at:381:423; Interrogation_Position=733; Antisense; GAGAAACTGATGGTGCCCGGCCTCA
>probe:Drosophila_2:1624261_at:445:321; Interrogation_Position=747; Antisense; GCCCGGCCTCATTGACGTGAAGAGT
>probe:Drosophila_2:1624261_at:62:615; Interrogation_Position=764; Antisense; TGAAGAGTGGTCTGTTCCTGGCCCG
>probe:Drosophila_2:1624261_at:485:689; Interrogation_Position=795; Antisense; TTTGACGGCCAAAGCGGATCTAATC
>probe:Drosophila_2:1624261_at:602:545; Interrogation_Position=810; Antisense; GGATCTAATCTATGCTAGCCAACAG
>probe:Drosophila_2:1624261_at:97:193; Interrogation_Position=847; Antisense; AACTACATGAACGTGGCGCCGCAAT
>probe:Drosophila_2:1624261_at:24:343; Interrogation_Position=878; Antisense; GCTTCAATGGTGGTCAGTGGTCCAA
>probe:Drosophila_2:1624261_at:341:587; Interrogation_Position=905; Antisense; TGGAGGAATCCACCCGACAATATGT
>probe:Drosophila_2:1624261_at:114:347; Interrogation_Position=941; Antisense; GCATCACGGCCACTGTGTATACGGG
>probe:Drosophila_2:1624261_at:265:515; Interrogation_Position=955; Antisense; GTGTATACGGGCATCTATGGCGAAA

Paste this into a BLAST search page for me
GAATCGCTTTGGTGGGTGTGAATAAGAGTCCTATATCATCTGCGATCCAGCAGTGGCTTAGCTGGCTGCACAAAAATCTGTATGCCTGTTCGGTGGCGAAGAGAAACTGATGGTGCCCGGCCTCAGCCCGGCCTCATTGACGTGAAGAGTTGAAGAGTGGTCTGTTCCTGGCCCGTTTGACGGCCAAAGCGGATCTAATCGGATCTAATCTATGCTAGCCAACAGAACTACATGAACGTGGCGCCGCAATGCTTCAATGGTGGTCAGTGGTCCAATGGAGGAATCCACCCGACAATATGTGCATCACGGCCACTGTGTATACGGGGTGTATACGGGCATCTATGGCGAAA

Full Affymetrix probeset data:

Annotations for 1624261_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720