FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624277_at:

>probe:Drosophila_2:1624277_at:596:505; Interrogation_Position=2311; Antisense; GTGCGCAAAGACCAAATGACCTCCA
>probe:Drosophila_2:1624277_at:232:593; Interrogation_Position=2357; Antisense; TGGGCATGGCGCTCCTGCAAAAGAT
>probe:Drosophila_2:1624277_at:677:355; Interrogation_Position=2430; Antisense; GCAACCACTTTTGCTGGACGTCAAA
>probe:Drosophila_2:1624277_at:590:651; Interrogation_Position=2450; Antisense; TCAAATTGGACAAGCGTGGCCTGGT
>probe:Drosophila_2:1624277_at:487:611; Interrogation_Position=2484; Antisense; TGACTTAAGGCCACCGCAAATGCGT
>probe:Drosophila_2:1624277_at:614:31; Interrogation_Position=2627; Antisense; ATAAGCATCCCGTGTGTGTGCTCAA
>probe:Drosophila_2:1624277_at:82:517; Interrogation_Position=2642; Antisense; GTGTGCTCAACGAACTGACCTCGAA
>probe:Drosophila_2:1624277_at:618:211; Interrogation_Position=2665; Antisense; AAGAACAAGTGGATGCCGCCGCAGT
>probe:Drosophila_2:1624277_at:632:447; Interrogation_Position=2676; Antisense; GATGCCGCCGCAGTATAAGCTACGT
>probe:Drosophila_2:1624277_at:400:205; Interrogation_Position=2692; Antisense; AAGCTACGTCAGGATATCGGGCCCG
>probe:Drosophila_2:1624277_at:252:471; Interrogation_Position=2726; Antisense; GTTCCTTTCTCTTTTCGGTCGAGAT
>probe:Drosophila_2:1624277_at:707:659; Interrogation_Position=2751; Antisense; TAACGGACAGACCTTTACGCCGGAT
>probe:Drosophila_2:1624277_at:483:233; Interrogation_Position=2809; Antisense; AATGCGGCCGCCTTATGTCTGCGAT
>probe:Drosophila_2:1624277_at:113:499; Interrogation_Position=2825; Antisense; GTCTGCGATCTTTAGGCATTCTTCC

Paste this into a BLAST search page for me
GTGCGCAAAGACCAAATGACCTCCATGGGCATGGCGCTCCTGCAAAAGATGCAACCACTTTTGCTGGACGTCAAATCAAATTGGACAAGCGTGGCCTGGTTGACTTAAGGCCACCGCAAATGCGTATAAGCATCCCGTGTGTGTGCTCAAGTGTGCTCAACGAACTGACCTCGAAAAGAACAAGTGGATGCCGCCGCAGTGATGCCGCCGCAGTATAAGCTACGTAAGCTACGTCAGGATATCGGGCCCGGTTCCTTTCTCTTTTCGGTCGAGATTAACGGACAGACCTTTACGCCGGATAATGCGGCCGCCTTATGTCTGCGATGTCTGCGATCTTTAGGCATTCTTCC

Full Affymetrix probeset data:

Annotations for 1624277_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720