FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624345_a_at:

>probe:Drosophila_2:1624345_a_at:270:91; Interrogation_Position=1167; Antisense; AGTATGGTCTTATCTATCACTCCTC
>probe:Drosophila_2:1624345_a_at:232:647; Interrogation_Position=1194; Antisense; TCATTGGTCGAGCTGGCCTGAAGAA
>probe:Drosophila_2:1624345_a_at:619:211; Interrogation_Position=1214; Antisense; AAGAACAAGGGTCGCATCTCTCGAT
>probe:Drosophila_2:1624345_a_at:84:187; Interrogation_Position=1247; Antisense; AACAAGTGCTCCATCGCGTCGCGTA
>probe:Drosophila_2:1624345_a_at:517:327; Interrogation_Position=1267; Antisense; GCGTATCGATTGCTTCCTGGAACAG
>probe:Drosophila_2:1624345_a_at:112:189; Interrogation_Position=1287; Antisense; AACAGCCGACTAGCGTGTTTGGCGA
>probe:Drosophila_2:1624345_a_at:549:579; Interrogation_Position=1306; Antisense; TGGCGAAACTCTTAAGCAACAGGTC
>probe:Drosophila_2:1624345_a_at:79:501; Interrogation_Position=1328; Antisense; GTCGAAGATCGCCTCAAGTTCTACG
>probe:Drosophila_2:1624345_a_at:266:217; Interrogation_Position=1343; Antisense; AAGTTCTACGAGTCCGGCGATGTGC
>probe:Drosophila_2:1624345_a_at:11:597; Interrogation_Position=1363; Antisense; TGTGCCGCGCAAGAACATTGAGGTA
>probe:Drosophila_2:1624345_a_at:12:213; Interrogation_Position=1416; Antisense; AAGAGGCGGCAATCACTGTACAGTC
>probe:Drosophila_2:1624345_a_at:107:549; Interrogation_Position=1606; Antisense; GGAGGCGTAAATGTCTCTGTTACAT
>probe:Drosophila_2:1624345_a_at:274:53; Interrogation_Position=1670; Antisense; ATGCTTCTTTTGTATTTCCTTTGAC
>probe:Drosophila_2:1624345_a_at:232:301; Interrogation_Position=1695; Antisense; CCCCTGATGGATCGCATTTCAAATA

Paste this into a BLAST search page for me
AGTATGGTCTTATCTATCACTCCTCTCATTGGTCGAGCTGGCCTGAAGAAAAGAACAAGGGTCGCATCTCTCGATAACAAGTGCTCCATCGCGTCGCGTAGCGTATCGATTGCTTCCTGGAACAGAACAGCCGACTAGCGTGTTTGGCGATGGCGAAACTCTTAAGCAACAGGTCGTCGAAGATCGCCTCAAGTTCTACGAAGTTCTACGAGTCCGGCGATGTGCTGTGCCGCGCAAGAACATTGAGGTAAAGAGGCGGCAATCACTGTACAGTCGGAGGCGTAAATGTCTCTGTTACATATGCTTCTTTTGTATTTCCTTTGACCCCCTGATGGATCGCATTTCAAATA

Full Affymetrix probeset data:

Annotations for 1624345_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720