Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624353_at:

>probe:Drosophila_2:1624353_at:15:683; Interrogation_Position=8134; Antisense; TATGTAAACTATACGCCACCTTGAT
>probe:Drosophila_2:1624353_at:651:685; Interrogation_Position=8143; Antisense; TATACGCCACCTTGATTCCTAAAAA
>probe:Drosophila_2:1624353_at:43:701; Interrogation_Position=8187; Antisense; TTTATATATCCACACACGACCTCTT
>probe:Drosophila_2:1624353_at:11:303; Interrogation_Position=8212; Antisense; CCCCGATTTCTGTTTATATACATGT
>probe:Drosophila_2:1624353_at:20:271; Interrogation_Position=8232; Antisense; CATGTTTCTTTTGTATGTTGCATAG
>probe:Drosophila_2:1624353_at:562:361; Interrogation_Position=8287; Antisense; GAATTTGTATTCGAAGGGAGGTCCA
>probe:Drosophila_2:1624353_at:82:83; Interrogation_Position=8301; Antisense; AGGGAGGTCCAGACACTAATTCGGA
>probe:Drosophila_2:1624353_at:523:13; Interrogation_Position=8326; Antisense; ATTCACTTTGAATATGCATTGCTGT
>probe:Drosophila_2:1624353_at:228:345; Interrogation_Position=8341; Antisense; GCATTGCTGTATTTTCCACATCTAA
>probe:Drosophila_2:1624353_at:88:453; Interrogation_Position=8379; Antisense; GATCTATCTGTCTATATAACTACGA
>probe:Drosophila_2:1624353_at:702:357; Interrogation_Position=8438; Antisense; GCAAATGAATTGTTCTCCCTGGTTT
>probe:Drosophila_2:1624353_at:80:633; Interrogation_Position=8453; Antisense; TCCCTGGTTTCTCTTATCAATGTAT
>probe:Drosophila_2:1624353_at:167:33; Interrogation_Position=8468; Antisense; ATCAATGTATTCTCCTCTGTGTTTC
>probe:Drosophila_2:1624353_at:605:685; Interrogation_Position=8475; Antisense; TATTCTCCTCTGTGTTTCTTTTTTA

Paste this into a BLAST search page for me
TATGTAAACTATACGCCACCTTGATTATACGCCACCTTGATTCCTAAAAATTTATATATCCACACACGACCTCTTCCCCGATTTCTGTTTATATACATGTCATGTTTCTTTTGTATGTTGCATAGGAATTTGTATTCGAAGGGAGGTCCAAGGGAGGTCCAGACACTAATTCGGAATTCACTTTGAATATGCATTGCTGTGCATTGCTGTATTTTCCACATCTAAGATCTATCTGTCTATATAACTACGAGCAAATGAATTGTTCTCCCTGGTTTTCCCTGGTTTCTCTTATCAATGTATATCAATGTATTCTCCTCTGTGTTTCTATTCTCCTCTGTGTTTCTTTTTTA

Full Affymetrix probeset data:

Annotations for 1624353_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime