FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624444_at:

>probe:Drosophila_2:1624444_at:54:269; Interrogation_Position=101; Antisense; CATGTACGTCAACCCGAATTACGTT
>probe:Drosophila_2:1624444_at:630:631; Interrogation_Position=13; Antisense; TCCGTTCCACCTTCAATAGTTAACA
>probe:Drosophila_2:1624444_at:106:555; Interrogation_Position=165; Antisense; GGACCCTGTGGTGGATGTGGCCCCT
>probe:Drosophila_2:1624444_at:595:629; Interrogation_Position=218; Antisense; TCCTTGCGGAGGATGTGGACCTTGC
>probe:Drosophila_2:1624444_at:677:571; Interrogation_Position=246; Antisense; GGCGGCACCAGCAGTTTTTGCGGTT
>probe:Drosophila_2:1624444_at:318:91; Interrogation_Position=258; Antisense; AGTTTTTGCGGTTGCGGTCCTTGCT
>probe:Drosophila_2:1624444_at:575:535; Interrogation_Position=273; Antisense; GGTCCTTGCTGCTAAACCAGTTGAC
>probe:Drosophila_2:1624444_at:487:597; Interrogation_Position=279; Antisense; TGCTGCTAAACCAGTTGACCCGGAA
>probe:Drosophila_2:1624444_at:664:575; Interrogation_Position=294; Antisense; TGACCCGGAAACCTGTCGGAATACT
>probe:Drosophila_2:1624444_at:103:277; Interrogation_Position=306; Antisense; CTGTCGGAATACTTCCGGGAACTAT
>probe:Drosophila_2:1624444_at:658:147; Interrogation_Position=316; Antisense; ACTTCCGGGAACTATGTAAATCTCA
>probe:Drosophila_2:1624444_at:56:663; Interrogation_Position=346; Antisense; TAAACTGTGTGGGAGACAACAAATT
>probe:Drosophila_2:1624444_at:483:691; Interrogation_Position=55; Antisense; TTTCGATTCCGGTTGGGAAATATCT
>probe:Drosophila_2:1624444_at:563:269; Interrogation_Position=95; Antisense; CATGTACATGTACGTCAACCCGAAT

Paste this into a BLAST search page for me
CATGTACGTCAACCCGAATTACGTTTCCGTTCCACCTTCAATAGTTAACAGGACCCTGTGGTGGATGTGGCCCCTTCCTTGCGGAGGATGTGGACCTTGCGGCGGCACCAGCAGTTTTTGCGGTTAGTTTTTGCGGTTGCGGTCCTTGCTGGTCCTTGCTGCTAAACCAGTTGACTGCTGCTAAACCAGTTGACCCGGAATGACCCGGAAACCTGTCGGAATACTCTGTCGGAATACTTCCGGGAACTATACTTCCGGGAACTATGTAAATCTCATAAACTGTGTGGGAGACAACAAATTTTTCGATTCCGGTTGGGAAATATCTCATGTACATGTACGTCAACCCGAAT

Full Affymetrix probeset data:

Annotations for 1624444_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720