FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624463_s_at:

>probe:Drosophila_2:1624463_s_at:317:25; Interrogation_Position=2782; Antisense; ATAGGTCTAATGTCAATTTCGATCT
>probe:Drosophila_2:1624463_s_at:298:249; Interrogation_Position=2795; Antisense; CAATTTCGATCTTCGGCGTTACCAA
>probe:Drosophila_2:1624463_s_at:225:653; Interrogation_Position=2839; Antisense; TAATATTTCCCTTTGGGTCAGTGAA
>probe:Drosophila_2:1624463_s_at:458:247; Interrogation_Position=2925; Antisense; AATTGATATTAGACCCATGATCCCC
>probe:Drosophila_2:1624463_s_at:719:267; Interrogation_Position=2940; Antisense; CATGATCCCCAAAGCAAAATGCCTT
>probe:Drosophila_2:1624463_s_at:151:489; Interrogation_Position=2971; Antisense; GTACGATTACGATTCAATCCCTATA
>probe:Drosophila_2:1624463_s_at:306:31; Interrogation_Position=2993; Antisense; ATAAGACTCATTATCGATCCACCCG
>probe:Drosophila_2:1624463_s_at:1:179; Interrogation_Position=3057; Antisense; AAACTCATGAGCATCTTTTTGGATT
>probe:Drosophila_2:1624463_s_at:469:459; Interrogation_Position=3078; Antisense; GATTTGTTAGCGTTTCATTATGTTT
>probe:Drosophila_2:1624463_s_at:680:131; Interrogation_Position=3158; Antisense; ACGCGCTTAAGCATTAAGGCATCTT
>probe:Drosophila_2:1624463_s_at:489:57; Interrogation_Position=3232; Antisense; ATGATGTTGATGAAGCCACGCATTC
>probe:Drosophila_2:1624463_s_at:377:379; Interrogation_Position=3243; Antisense; GAAGCCACGCATTCACATTGACAAG
>probe:Drosophila_2:1624463_s_at:54:145; Interrogation_Position=3324; Antisense; ACTATTACGTACTATTTACTGCCAT
>probe:Drosophila_2:1624463_s_at:62:709; Interrogation_Position=3339; Antisense; TTACTGCCATAGAGCTATACACTCC

Paste this into a BLAST search page for me
ATAGGTCTAATGTCAATTTCGATCTCAATTTCGATCTTCGGCGTTACCAATAATATTTCCCTTTGGGTCAGTGAAAATTGATATTAGACCCATGATCCCCCATGATCCCCAAAGCAAAATGCCTTGTACGATTACGATTCAATCCCTATAATAAGACTCATTATCGATCCACCCGAAACTCATGAGCATCTTTTTGGATTGATTTGTTAGCGTTTCATTATGTTTACGCGCTTAAGCATTAAGGCATCTTATGATGTTGATGAAGCCACGCATTCGAAGCCACGCATTCACATTGACAAGACTATTACGTACTATTTACTGCCATTTACTGCCATAGAGCTATACACTCC

Full Affymetrix probeset data:

Annotations for 1624463_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720