FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624489_a_at:

>probe:Drosophila_2:1624489_a_at:217:297; Interrogation_Position=1237; Antisense; CGCACAGAACCCGTCTTCAATGAAA
>probe:Drosophila_2:1624489_a_at:21:189; Interrogation_Position=1260; Antisense; AACAGAGCGAGTACCAGAGTCTTTT
>probe:Drosophila_2:1624489_a_at:476:101; Interrogation_Position=1275; Antisense; AGAGTCTTTTCTGGGTCTGCCGCAA
>probe:Drosophila_2:1624489_a_at:572:625; Interrogation_Position=1292; Antisense; TGCCGCAAGCCGGATCTATTTGAGG
>probe:Drosophila_2:1624489_a_at:729:629; Interrogation_Position=1340; Antisense; TCCAGGGAGCCACACGATCTTATTG
>probe:Drosophila_2:1624489_a_at:233:293; Interrogation_Position=1354; Antisense; CGATCTTATTGTGCGCGAGGACAGC
>probe:Drosophila_2:1624489_a_at:113:313; Interrogation_Position=1445; Antisense; GCCACAGCCAACTGCGAGACTGAGA
>probe:Drosophila_2:1624489_a_at:716:551; Interrogation_Position=1474; Antisense; GGAGCAGCCATCGTGATAGCCATTG
>probe:Drosophila_2:1624489_a_at:317:219; Interrogation_Position=1540; Antisense; AAGTGCAAACCCACCTACAGATGGC
>probe:Drosophila_2:1624489_a_at:685:385; Interrogation_Position=1570; Antisense; GAACATCTTAATTACCACGTCACAG
>probe:Drosophila_2:1624489_a_at:431:399; Interrogation_Position=1610; Antisense; GACACTGCAGTGCTTCGATGTTATA
>probe:Drosophila_2:1624489_a_at:279:125; Interrogation_Position=1648; Antisense; ACCTATTATTTACTCCTACACACTG
>probe:Drosophila_2:1624489_a_at:120:73; Interrogation_Position=1714; Antisense; AGGACAATTTCTCGCTCATTATGCT
>probe:Drosophila_2:1624489_a_at:309:111; Interrogation_Position=1763; Antisense; AGCGTCCCAACTAGGTCAACCAAAT

Paste this into a BLAST search page for me
CGCACAGAACCCGTCTTCAATGAAAAACAGAGCGAGTACCAGAGTCTTTTAGAGTCTTTTCTGGGTCTGCCGCAATGCCGCAAGCCGGATCTATTTGAGGTCCAGGGAGCCACACGATCTTATTGCGATCTTATTGTGCGCGAGGACAGCGCCACAGCCAACTGCGAGACTGAGAGGAGCAGCCATCGTGATAGCCATTGAAGTGCAAACCCACCTACAGATGGCGAACATCTTAATTACCACGTCACAGGACACTGCAGTGCTTCGATGTTATAACCTATTATTTACTCCTACACACTGAGGACAATTTCTCGCTCATTATGCTAGCGTCCCAACTAGGTCAACCAAAT

Full Affymetrix probeset data:

Annotations for 1624489_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720