FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624589_a_at:

>probe:Drosophila_2:1624589_a_at:208:485; Interrogation_Position=3858; Antisense; GTAGCTATTGTAACTTTCGACAACC
>probe:Drosophila_2:1624589_a_at:500:191; Interrogation_Position=3869; Antisense; AACTTTCGACAACCATCAGCAGATT
>probe:Drosophila_2:1624589_a_at:213:259; Interrogation_Position=3885; Antisense; CAGCAGATTGCAAAAGACTTCACGT
>probe:Drosophila_2:1624589_a_at:333:465; Interrogation_Position=4064; Antisense; GTTGAAATTGCTTGATAATCGGTTT
>probe:Drosophila_2:1624589_a_at:467:385; Interrogation_Position=4097; Antisense; GAACACGCCCAAAATGTAGCTTATG
>probe:Drosophila_2:1624589_a_at:387:487; Interrogation_Position=4112; Antisense; GTAGCTTATGCAGAACCAAAATCAC
>probe:Drosophila_2:1624589_a_at:278:129; Interrogation_Position=4172; Antisense; ACTCGTTTTAGATATTATACTGCGG
>probe:Drosophila_2:1624589_a_at:130:247; Interrogation_Position=4201; Antisense; AATTGGATTCTGATTGTATGACGGA
>probe:Drosophila_2:1624589_a_at:450:5; Interrogation_Position=4213; Antisense; ATTGTATGACGGAATCTGGGTAGAC
>probe:Drosophila_2:1624589_a_at:31:15; Interrogation_Position=4299; Antisense; ATTACTATATGTATACACCCCTATG
>probe:Drosophila_2:1624589_a_at:182:261; Interrogation_Position=4314; Antisense; CACCCCTATGTATTGTGTACGCTAT
>probe:Drosophila_2:1624589_a_at:146:515; Interrogation_Position=4328; Antisense; GTGTACGCTATTTGTACGAATTACA
>probe:Drosophila_2:1624589_a_at:681:187; Interrogation_Position=4361; Antisense; AACGTGACAAACTCAATCTAATTGG
>probe:Drosophila_2:1624589_a_at:471:561; Interrogation_Position=4388; Antisense; GGAAAAGTAGCACACAAAAACCACA

Paste this into a BLAST search page for me
GTAGCTATTGTAACTTTCGACAACCAACTTTCGACAACCATCAGCAGATTCAGCAGATTGCAAAAGACTTCACGTGTTGAAATTGCTTGATAATCGGTTTGAACACGCCCAAAATGTAGCTTATGGTAGCTTATGCAGAACCAAAATCACACTCGTTTTAGATATTATACTGCGGAATTGGATTCTGATTGTATGACGGAATTGTATGACGGAATCTGGGTAGACATTACTATATGTATACACCCCTATGCACCCCTATGTATTGTGTACGCTATGTGTACGCTATTTGTACGAATTACAAACGTGACAAACTCAATCTAATTGGGGAAAAGTAGCACACAAAAACCACA

Full Affymetrix probeset data:

Annotations for 1624589_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720