FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624604_a_at:

>probe:Drosophila_2:1624604_a_at:727:449; Interrogation_Position=1698; Antisense; GATCGGGATCCATATTGCGTGACCA
>probe:Drosophila_2:1624604_a_at:467:343; Interrogation_Position=1727; Antisense; GCATTATTGCCGTGTTCTGAATCCG
>probe:Drosophila_2:1624604_a_at:663:17; Interrogation_Position=1826; Antisense; ATTTACATTCGATTCATCCTTGCCC
>probe:Drosophila_2:1624604_a_at:257:47; Interrogation_Position=1841; Antisense; ATCCTTGCCCTTGGACTTTGAGTTC
>probe:Drosophila_2:1624604_a_at:291:607; Interrogation_Position=1859; Antisense; TGAGTTCCCGCCACAATTTAGCTAT
>probe:Drosophila_2:1624604_a_at:453:117; Interrogation_Position=1878; Antisense; AGCTATCTATTTATGGTCGCGCCTC
>probe:Drosophila_2:1624604_a_at:141:609; Interrogation_Position=1904; Antisense; TAATTGAGGTGGCACCGCTCCATTA
>probe:Drosophila_2:1624604_a_at:102:337; Interrogation_Position=1920; Antisense; GCTCCATTAGTCCATTATCCTGTTG
>probe:Drosophila_2:1624604_a_at:124:3; Interrogation_Position=1973; Antisense; ATTGGCCCTATTGTTGTCCTGAGAA
>probe:Drosophila_2:1624604_a_at:397:443; Interrogation_Position=2000; Antisense; GATGTCACTTGTATGTATCCGCCAT
>probe:Drosophila_2:1624604_a_at:137:627; Interrogation_Position=2057; Antisense; TGCCGGCACGTTTATGTCATCGAGT
>probe:Drosophila_2:1624604_a_at:540:599; Interrogation_Position=2071; Antisense; TGTCATCGAGTATACGCAGCGTGTT
>probe:Drosophila_2:1624604_a_at:366:263; Interrogation_Position=2087; Antisense; CAGCGTGTTGCGCAGACATCAATAA
>probe:Drosophila_2:1624604_a_at:430:613; Interrogation_Position=2162; Antisense; TGAAGCATCGATCGATCCGGCGAAC

Paste this into a BLAST search page for me
GATCGGGATCCATATTGCGTGACCAGCATTATTGCCGTGTTCTGAATCCGATTTACATTCGATTCATCCTTGCCCATCCTTGCCCTTGGACTTTGAGTTCTGAGTTCCCGCCACAATTTAGCTATAGCTATCTATTTATGGTCGCGCCTCTAATTGAGGTGGCACCGCTCCATTAGCTCCATTAGTCCATTATCCTGTTGATTGGCCCTATTGTTGTCCTGAGAAGATGTCACTTGTATGTATCCGCCATTGCCGGCACGTTTATGTCATCGAGTTGTCATCGAGTATACGCAGCGTGTTCAGCGTGTTGCGCAGACATCAATAATGAAGCATCGATCGATCCGGCGAAC

Full Affymetrix probeset data:

Annotations for 1624604_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720