FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624649_a_at:

>probe:Drosophila_2:1624649_a_at:454:493; Interrogation_Position=1759; Antisense; GTAATGTAATACCATGGCCCTTATT
>probe:Drosophila_2:1624649_a_at:640:581; Interrogation_Position=1773; Antisense; TGGCCCTTATTTATGTTTGCTACGA
>probe:Drosophila_2:1624649_a_at:461:233; Interrogation_Position=1806; Antisense; AATCCACCAAGTCAGCAGTCAATCG
>probe:Drosophila_2:1624649_a_at:296:259; Interrogation_Position=1821; Antisense; CAGTCAATCGGTACTTAAAGTCGGT
>probe:Drosophila_2:1624649_a_at:204:151; Interrogation_Position=1885; Antisense; ACATACATACTTAGGTGCACACGGA
>probe:Drosophila_2:1624649_a_at:304:481; Interrogation_Position=2024; Antisense; GTATATCCGTAATTGTATTTCGCGT
>probe:Drosophila_2:1624649_a_at:667:475; Interrogation_Position=2038; Antisense; GTATTTCGCGTACTCGTTAATGGTT
>probe:Drosophila_2:1624649_a_at:489:657; Interrogation_Position=2069; Antisense; TAAGAGCGCCCAATCCTAATCTAAT
>probe:Drosophila_2:1624649_a_at:47:159; Interrogation_Position=2097; Antisense; AAGTCATTTGTATCAACGGCCTTTA
>probe:Drosophila_2:1624649_a_at:708:683; Interrogation_Position=2107; Antisense; TATCAACGGCCTTTACTTCTCGTTT
>probe:Drosophila_2:1624649_a_at:350:443; Interrogation_Position=2128; Antisense; GTTTACTTTATACATCTACCAGGGA
>probe:Drosophila_2:1624649_a_at:334:231; Interrogation_Position=2226; Antisense; AATTGCCTAAGCACCCCACTAAATG
>probe:Drosophila_2:1624649_a_at:288:203; Interrogation_Position=2286; Antisense; AAGCGTACTTACTGTCCACATTCAT
>probe:Drosophila_2:1624649_a_at:409:505; Interrogation_Position=2299; Antisense; GTCCACATTCATTTACTTGTTGTTG

Paste this into a BLAST search page for me
GTAATGTAATACCATGGCCCTTATTTGGCCCTTATTTATGTTTGCTACGAAATCCACCAAGTCAGCAGTCAATCGCAGTCAATCGGTACTTAAAGTCGGTACATACATACTTAGGTGCACACGGAGTATATCCGTAATTGTATTTCGCGTGTATTTCGCGTACTCGTTAATGGTTTAAGAGCGCCCAATCCTAATCTAATAAGTCATTTGTATCAACGGCCTTTATATCAACGGCCTTTACTTCTCGTTTGTTTACTTTATACATCTACCAGGGAAATTGCCTAAGCACCCCACTAAATGAAGCGTACTTACTGTCCACATTCATGTCCACATTCATTTACTTGTTGTTG

Full Affymetrix probeset data:

Annotations for 1624649_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720