FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624680_a_at:

>probe:Drosophila_2:1624680_a_at:435:381; Interrogation_Position=1629; Antisense; GAACCGCATCTCAAAGTTGTACAAA
>probe:Drosophila_2:1624680_a_at:273:7; Interrogation_Position=1657; Antisense; ATTGCTGCCGGTGACAAGGTGGCCA
>probe:Drosophila_2:1624680_a_at:430:223; Interrogation_Position=1672; Antisense; AAGGTGGCCAATGTACGCGGCATCC
>probe:Drosophila_2:1624680_a_at:187:569; Interrogation_Position=1690; Antisense; GGCATCCTCAAACGCAGCAATGTAC
>probe:Drosophila_2:1624680_a_at:16:59; Interrogation_Position=1709; Antisense; ATGTACCGGCGCCTAACAATGATCA
>probe:Drosophila_2:1624680_a_at:196:57; Interrogation_Position=1727; Antisense; ATGATCACGATCCAAGCTACGGCTT
>probe:Drosophila_2:1624680_a_at:123:165; Interrogation_Position=1774; Antisense; AAATCGTATTTCAGGGCCCACAATG
>probe:Drosophila_2:1624680_a_at:259:519; Interrogation_Position=1798; Antisense; GTGGACAACACCATACCAACATTTG
>probe:Drosophila_2:1624680_a_at:269:559; Interrogation_Position=1848; Antisense; GGACAATATGTTCCCTGTGCATTTA
>probe:Drosophila_2:1624680_a_at:238:89; Interrogation_Position=1876; Antisense; AGTCATGAGGAGATCTGCACGCCGC
>probe:Drosophila_2:1624680_a_at:129:327; Interrogation_Position=1913; Antisense; GCGTCAAGTTCGACGACACCTTGGA
>probe:Drosophila_2:1624680_a_at:32:267; Interrogation_Position=1940; Antisense; CAGTGTCTCCGGTTTTGGTCGAGAA
>probe:Drosophila_2:1624680_a_at:666:107; Interrogation_Position=1961; Antisense; AGAAGCCTTTTGCTTTCTCCAGCGA
>probe:Drosophila_2:1624680_a_at:328:183; Interrogation_Position=2001; Antisense; AAAACCCACATCTTTGCGTGAGCGG

Paste this into a BLAST search page for me
GAACCGCATCTCAAAGTTGTACAAAATTGCTGCCGGTGACAAGGTGGCCAAAGGTGGCCAATGTACGCGGCATCCGGCATCCTCAAACGCAGCAATGTACATGTACCGGCGCCTAACAATGATCAATGATCACGATCCAAGCTACGGCTTAAATCGTATTTCAGGGCCCACAATGGTGGACAACACCATACCAACATTTGGGACAATATGTTCCCTGTGCATTTAAGTCATGAGGAGATCTGCACGCCGCGCGTCAAGTTCGACGACACCTTGGACAGTGTCTCCGGTTTTGGTCGAGAAAGAAGCCTTTTGCTTTCTCCAGCGAAAAACCCACATCTTTGCGTGAGCGG

Full Affymetrix probeset data:

Annotations for 1624680_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720