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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624686_a_at:

>probe:Drosophila_2:1624686_a_at:235:67; Interrogation_Position=3506; Antisense; ATGGACATTAGTCCCATGTGCGATC
>probe:Drosophila_2:1624686_a_at:344:63; Interrogation_Position=3521; Antisense; ATGTGCGATCGCCATAATGCCACCA
>probe:Drosophila_2:1624686_a_at:354:49; Interrogation_Position=3537; Antisense; ATGCCACCATTGAGAAGTCGCAGGT
>probe:Drosophila_2:1624686_a_at:283:505; Interrogation_Position=3581; Antisense; GTCCACCCGCTATGGGAGACCTGGG
>probe:Drosophila_2:1624686_a_at:65:103; Interrogation_Position=3597; Antisense; AGACCTGGGCGGACCTGGTGCATCC
>probe:Drosophila_2:1624686_a_at:224:547; Interrogation_Position=3622; Antisense; GGATGCCCAGGATATACTCGACACG
>probe:Drosophila_2:1624686_a_at:195:669; Interrogation_Position=3665; Antisense; TACTACCAGAGCATGATACCGCCTT
>probe:Drosophila_2:1624686_a_at:185:41; Interrogation_Position=3700; Antisense; ATCGGGCGTCGATGAGAATCCGCAG
>probe:Drosophila_2:1624686_a_at:122:301; Interrogation_Position=3719; Antisense; CCGCAGGAGGACAGGATACGCTTTC
>probe:Drosophila_2:1624686_a_at:326:77; Interrogation_Position=3731; Antisense; AGGATACGCTTTCAAGTAACCCTTG
>probe:Drosophila_2:1624686_a_at:623:451; Interrogation_Position=3764; Antisense; GATCAGGAGAACCTCGCCGAACTGG
>probe:Drosophila_2:1624686_a_at:485:531; Interrogation_Position=3910; Antisense; GGGTGGCTGCCAAAACCAACCGCAA
>probe:Drosophila_2:1624686_a_at:68:101; Interrogation_Position=3953; Antisense; AGAGTCGTGGGAATTTATCGCAAAT
>probe:Drosophila_2:1624686_a_at:318:571; Interrogation_Position=3988; Antisense; GGCTCACAACTTTTTCCTATTACGT

Paste this into a BLAST search page for me
ATGGACATTAGTCCCATGTGCGATCATGTGCGATCGCCATAATGCCACCAATGCCACCATTGAGAAGTCGCAGGTGTCCACCCGCTATGGGAGACCTGGGAGACCTGGGCGGACCTGGTGCATCCGGATGCCCAGGATATACTCGACACGTACTACCAGAGCATGATACCGCCTTATCGGGCGTCGATGAGAATCCGCAGCCGCAGGAGGACAGGATACGCTTTCAGGATACGCTTTCAAGTAACCCTTGGATCAGGAGAACCTCGCCGAACTGGGGGTGGCTGCCAAAACCAACCGCAAAGAGTCGTGGGAATTTATCGCAAATGGCTCACAACTTTTTCCTATTACGT

Full Affymetrix probeset data:

Annotations for 1624686_a_at in Drosophila_2.na32.annot.csv


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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