FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624696_a_at:

>probe:Drosophila_2:1624696_a_at:63:113; Interrogation_Position=2375; Antisense; AGCAGCTAAACAACGTCTACGAGTT
>probe:Drosophila_2:1624696_a_at:314:213; Interrogation_Position=2419; Antisense; AAGAGCCACCAATAGCAGCCACAGT
>probe:Drosophila_2:1624696_a_at:555:113; Interrogation_Position=2432; Antisense; AGCAGCCACAGTTGGCCGGCAAGTA
>probe:Drosophila_2:1624696_a_at:665:451; Interrogation_Position=2487; Antisense; GATCTGGACGGTCCCAGTTATCGGA
>probe:Drosophila_2:1624696_a_at:448:121; Interrogation_Position=2534; Antisense; AGCGGAGCGGAGTCGATTCAGAATA
>probe:Drosophila_2:1624696_a_at:538:425; Interrogation_Position=2577; Antisense; GAGAGATTTTCCACAACCAGGCACA
>probe:Drosophila_2:1624696_a_at:630:71; Interrogation_Position=2595; Antisense; AGGCACACAGTTAAGCTCAGAGCAA
>probe:Drosophila_2:1624696_a_at:58:155; Interrogation_Position=2625; Antisense; ACACTTACCATCTAGTTCTACGTTT
>probe:Drosophila_2:1624696_a_at:173:479; Interrogation_Position=2646; Antisense; GTTTACACTTACGTCTACGTTACAT
>probe:Drosophila_2:1624696_a_at:136:401; Interrogation_Position=2744; Antisense; GAGCTACGTAGTTACCTAATCCCTT
>probe:Drosophila_2:1624696_a_at:675:257; Interrogation_Position=2850; Antisense; CACACATATATACCTTCCCGAAAAA
>probe:Drosophila_2:1624696_a_at:310:127; Interrogation_Position=2874; Antisense; ACCAACCCTGTTATGTAGTCTTATT
>probe:Drosophila_2:1624696_a_at:422:477; Interrogation_Position=2916; Antisense; GTTTAGTCCTTAAGTACTTGGCAAT
>probe:Drosophila_2:1624696_a_at:183:355; Interrogation_Position=2936; Antisense; GCAATAATTTCCAGCCGGTTCAACT

Paste this into a BLAST search page for me
AGCAGCTAAACAACGTCTACGAGTTAAGAGCCACCAATAGCAGCCACAGTAGCAGCCACAGTTGGCCGGCAAGTAGATCTGGACGGTCCCAGTTATCGGAAGCGGAGCGGAGTCGATTCAGAATAGAGAGATTTTCCACAACCAGGCACAAGGCACACAGTTAAGCTCAGAGCAAACACTTACCATCTAGTTCTACGTTTGTTTACACTTACGTCTACGTTACATGAGCTACGTAGTTACCTAATCCCTTCACACATATATACCTTCCCGAAAAAACCAACCCTGTTATGTAGTCTTATTGTTTAGTCCTTAAGTACTTGGCAATGCAATAATTTCCAGCCGGTTCAACT

Full Affymetrix probeset data:

Annotations for 1624696_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720