FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624718_a_at:

>probe:Drosophila_2:1624718_a_at:152:87; Interrogation_Position=144; Antisense; AGTCTGCAAGGAGCGCCCCGAAGCT
>probe:Drosophila_2:1624718_a_at:111:625; Interrogation_Position=179; Antisense; TGCGCATCGATGTCAATAACTCACT
>probe:Drosophila_2:1624718_a_at:2:193; Interrogation_Position=196; Antisense; AACTCACTTGAGGACACGAACTACA
>probe:Drosophila_2:1624718_a_at:26:233; Interrogation_Position=223; Antisense; AATGCGGTGGAATCAGAAGCTCAAA
>probe:Drosophila_2:1624718_a_at:611:337; Interrogation_Position=241; Antisense; GCTCAAAAGAATATCGCCGGCCTTG
>probe:Drosophila_2:1624718_a_at:554:317; Interrogation_Position=256; Antisense; GCCGGCCTTGATGAGGACCTTATCA
>probe:Drosophila_2:1624718_a_at:209:359; Interrogation_Position=283; Antisense; GAAGACTTCGGCGTCGAGGTCGTCC
>probe:Drosophila_2:1624718_a_at:702:393; Interrogation_Position=30; Antisense; GAAATCCCACCAAAAGCTCTTCAGG
>probe:Drosophila_2:1624718_a_at:590:297; Interrogation_Position=363; Antisense; CGCGAAACGGTTTTAATGATCATCA
>probe:Drosophila_2:1624718_a_at:557:189; Interrogation_Position=393; Antisense; AACATTGGCATCCTATGCCCGGTGC
>probe:Drosophila_2:1624718_a_at:16:599; Interrogation_Position=423; Antisense; TGTCCCAACTTGTCCGACATCAAGT
>probe:Drosophila_2:1624718_a_at:153:141; Interrogation_Position=439; Antisense; ACATCAAGTTAGAGCACCTGGTCAA
>probe:Drosophila_2:1624718_a_at:235:651; Interrogation_Position=460; Antisense; TCAAGGACCCCGACGTGGAGCAGGA
>probe:Drosophila_2:1624718_a_at:257:617; Interrogation_Position=487; Antisense; TGCAAAAGCGCAAGTCCGACAAGAT

Paste this into a BLAST search page for me
AGTCTGCAAGGAGCGCCCCGAAGCTTGCGCATCGATGTCAATAACTCACTAACTCACTTGAGGACACGAACTACAAATGCGGTGGAATCAGAAGCTCAAAGCTCAAAAGAATATCGCCGGCCTTGGCCGGCCTTGATGAGGACCTTATCAGAAGACTTCGGCGTCGAGGTCGTCCGAAATCCCACCAAAAGCTCTTCAGGCGCGAAACGGTTTTAATGATCATCAAACATTGGCATCCTATGCCCGGTGCTGTCCCAACTTGTCCGACATCAAGTACATCAAGTTAGAGCACCTGGTCAATCAAGGACCCCGACGTGGAGCAGGATGCAAAAGCGCAAGTCCGACAAGAT

Full Affymetrix probeset data:

Annotations for 1624718_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720