FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624945_a_at:

>probe:Drosophila_2:1624945_a_at:653:179; Interrogation_Position=1026; Antisense; AAACACCACCACTCAAGGTCCATGG
>probe:Drosophila_2:1624945_a_at:110:447; Interrogation_Position=1102; Antisense; GATCTGGAACAGCACCACTCTTGGC
>probe:Drosophila_2:1624945_a_at:456:187; Interrogation_Position=1130; Antisense; AACTTCAACTCCACTCAAGGTCCAT
>probe:Drosophila_2:1624945_a_at:374:221; Interrogation_Position=1146; Antisense; AAGGTCCATGGCTCGGCAACTCAAC
>probe:Drosophila_2:1624945_a_at:612:141; Interrogation_Position=1190; Antisense; ACGGCAGCTCCTTGGTGGAACAACA
>probe:Drosophila_2:1624945_a_at:686:531; Interrogation_Position=1203; Antisense; GGTGGAACAACACCACTGCCAGTTG
>probe:Drosophila_2:1624945_a_at:231:265; Interrogation_Position=1222; Antisense; CAGTTGGAACACTACCACCGAGGGA
>probe:Drosophila_2:1624945_a_at:722:557; Interrogation_Position=1244; Antisense; GGAAATTGGTTCGATCACCTGCTGA
>probe:Drosophila_2:1624945_a_at:153:455; Interrogation_Position=1256; Antisense; GATCACCTGCTGAACGAGATTGGAA
>probe:Drosophila_2:1624945_a_at:349:427; Interrogation_Position=1271; Antisense; GAGATTGGAAACCTCTTCTAGACTT
>probe:Drosophila_2:1624945_a_at:696:59; Interrogation_Position=1299; Antisense; ATGTCGCGAAAAGCAAACCTCAAAT
>probe:Drosophila_2:1624945_a_at:631:83; Interrogation_Position=1340; Antisense; AGTGGACTAAGCTTTAGGCCAGCAA
>probe:Drosophila_2:1624945_a_at:24:391; Interrogation_Position=906; Antisense; GAAACACCACTACTCAAGGCCCATG
>probe:Drosophila_2:1624945_a_at:25:391; Interrogation_Position=995; Antisense; GAAACACCACTACTCAAGGTCCATG

Paste this into a BLAST search page for me
AAACACCACCACTCAAGGTCCATGGGATCTGGAACAGCACCACTCTTGGCAACTTCAACTCCACTCAAGGTCCATAAGGTCCATGGCTCGGCAACTCAACACGGCAGCTCCTTGGTGGAACAACAGGTGGAACAACACCACTGCCAGTTGCAGTTGGAACACTACCACCGAGGGAGGAAATTGGTTCGATCACCTGCTGAGATCACCTGCTGAACGAGATTGGAAGAGATTGGAAACCTCTTCTAGACTTATGTCGCGAAAAGCAAACCTCAAATAGTGGACTAAGCTTTAGGCCAGCAAGAAACACCACTACTCAAGGCCCATGGAAACACCACTACTCAAGGTCCATG

Full Affymetrix probeset data:

Annotations for 1624945_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720