FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624950_a_at:

>probe:Drosophila_2:1624950_a_at:137:283; Interrogation_Position=1014; Antisense; CTGCACATGAGAGGACCCGGCGGCT
>probe:Drosophila_2:1624950_a_at:710:219; Interrogation_Position=732; Antisense; AAGTGCCTGGACTGCATGGCCACCA
>probe:Drosophila_2:1624950_a_at:586:579; Interrogation_Position=749; Antisense; GGCCACCACTGCCACGGATAATATT
>probe:Drosophila_2:1624950_a_at:305:655; Interrogation_Position=767; Antisense; TAATATTCCGGCAATCTGCAGGCAC
>probe:Drosophila_2:1624950_a_at:43:237; Interrogation_Position=779; Antisense; AATCTGCAGGCACCGAGGACGACCA
>probe:Drosophila_2:1624950_a_at:671:415; Interrogation_Position=807; Antisense; GAGCCGTGCGGCATTTATCGCATCT
>probe:Drosophila_2:1624950_a_at:374:347; Interrogation_Position=826; Antisense; GCATCTCCCACGTCTACTGGCAGGA
>probe:Drosophila_2:1624950_a_at:53:569; Interrogation_Position=844; Antisense; GGCAGGACGCACTCCGGATAATTGA
>probe:Drosophila_2:1624950_a_at:381:29; Interrogation_Position=861; Antisense; ATAATTGACCCGGACGACTCACTCG
>probe:Drosophila_2:1624950_a_at:237:651; Interrogation_Position=879; Antisense; TCACTCGCCCGGGACTACGGAAGAT
>probe:Drosophila_2:1624950_a_at:146:589; Interrogation_Position=910; Antisense; TGGATGTCCAGTGCGCCGAGCGTAT
>probe:Drosophila_2:1624950_a_at:383:323; Interrogation_Position=922; Antisense; GCGCCGAGCGTATTGTGCGTAGCTA
>probe:Drosophila_2:1624950_a_at:499:675; Interrogation_Position=941; Antisense; TAGCTATGTGCAGCGATATGGTGGC
>probe:Drosophila_2:1624950_a_at:382:599; Interrogation_Position=996; Antisense; TGTCGGGATCATGTGAGGCTGCACA

Paste this into a BLAST search page for me
CTGCACATGAGAGGACCCGGCGGCTAAGTGCCTGGACTGCATGGCCACCAGGCCACCACTGCCACGGATAATATTTAATATTCCGGCAATCTGCAGGCACAATCTGCAGGCACCGAGGACGACCAGAGCCGTGCGGCATTTATCGCATCTGCATCTCCCACGTCTACTGGCAGGAGGCAGGACGCACTCCGGATAATTGAATAATTGACCCGGACGACTCACTCGTCACTCGCCCGGGACTACGGAAGATTGGATGTCCAGTGCGCCGAGCGTATGCGCCGAGCGTATTGTGCGTAGCTATAGCTATGTGCAGCGATATGGTGGCTGTCGGGATCATGTGAGGCTGCACA

Full Affymetrix probeset data:

Annotations for 1624950_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720