FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624966_at:

>probe:Drosophila_2:1624966_at:516:613; Interrogation_Position=110; Antisense; TGAACGATCAGATGGGCGTCCGGTT
>probe:Drosophila_2:1624966_at:263:319; Interrogation_Position=151; Antisense; GCCGACTTTGGCCAGCTGAAGCTGC
>probe:Drosophila_2:1624966_at:204:615; Interrogation_Position=167; Antisense; TGAAGCTGCTGGAGTTCTTTGTGCG
>probe:Drosophila_2:1624966_at:11:565; Interrogation_Position=212; Antisense; GGAAGGACAAGTACGGCATCACACC
>probe:Drosophila_2:1624966_at:667:29; Interrogation_Position=263; Antisense; ATACACGCTGCGTCGAGTTCCTGCT
>probe:Drosophila_2:1624966_at:653:467; Interrogation_Position=279; Antisense; GTTCCTGCTCCGGATGGGAGCCAGC
>probe:Drosophila_2:1624966_at:460:165; Interrogation_Position=29; Antisense; AAATCGAGGACATCATCTGGACAAT
>probe:Drosophila_2:1624966_at:395:319; Interrogation_Position=343; Antisense; GCCGCCGAGCAGGAGGACATTAGAC
>probe:Drosophila_2:1624966_at:452:149; Interrogation_Position=359; Antisense; ACATTAGACGGCTCCTGGCGCGGGA
>probe:Drosophila_2:1624966_at:612:39; Interrogation_Position=43; Antisense; ATCTGGACAATCAAGAACGGCGTGT
>probe:Drosophila_2:1624966_at:678:649; Interrogation_Position=53; Antisense; TCAAGAACGGCGTGTACGACGAGGT
>probe:Drosophila_2:1624966_at:539:519; Interrogation_Position=76; Antisense; GTGGAGCGAATTTTCCTAGCCGGAT
>probe:Drosophila_2:1624966_at:175:639; Interrogation_Position=87; Antisense; TTTCCTAGCCGGATCGCTTAATGTG
>probe:Drosophila_2:1624966_at:34:675; Interrogation_Position=92; Antisense; TAGCCGGATCGCTTAATGTGAACGA

Paste this into a BLAST search page for me
TGAACGATCAGATGGGCGTCCGGTTGCCGACTTTGGCCAGCTGAAGCTGCTGAAGCTGCTGGAGTTCTTTGTGCGGGAAGGACAAGTACGGCATCACACCATACACGCTGCGTCGAGTTCCTGCTGTTCCTGCTCCGGATGGGAGCCAGCAAATCGAGGACATCATCTGGACAATGCCGCCGAGCAGGAGGACATTAGACACATTAGACGGCTCCTGGCGCGGGAATCTGGACAATCAAGAACGGCGTGTTCAAGAACGGCGTGTACGACGAGGTGTGGAGCGAATTTTCCTAGCCGGATTTTCCTAGCCGGATCGCTTAATGTGTAGCCGGATCGCTTAATGTGAACGA

Full Affymetrix probeset data:

Annotations for 1624966_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720