FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1624990_at:

>probe:Drosophila_2:1624990_at:232:271; Interrogation_Position=3240; Antisense; CTTAGCTCAAAACTTAGCACCGCTC
>probe:Drosophila_2:1624990_at:415:113; Interrogation_Position=3255; Antisense; AGCACCGCTCATAATCTAGTTAGTA
>probe:Drosophila_2:1624990_at:246:65; Interrogation_Position=3296; Antisense; ATGGAGAATGGACGCCCTTCCCCGG
>probe:Drosophila_2:1624990_at:130:557; Interrogation_Position=3319; Antisense; GGACTTTCCGCCATAGAGCTGGACT
>probe:Drosophila_2:1624990_at:650:415; Interrogation_Position=3334; Antisense; GAGCTGGACTCCTCTGTGAAGGGAT
>probe:Drosophila_2:1624990_at:643:27; Interrogation_Position=3390; Antisense; ATACCTACACCTAACTATATTGCCT
>probe:Drosophila_2:1624990_at:232:9; Interrogation_Position=3408; Antisense; ATTGCCTATGTAAGTGTGCGCACTT
>probe:Drosophila_2:1624990_at:321:105; Interrogation_Position=3463; Antisense; AGACTACTCTGGACACGTCGACATA
>probe:Drosophila_2:1624990_at:530:693; Interrogation_Position=3493; Antisense; TTTCAGCTTAAGACTCGGAACTCGG
>probe:Drosophila_2:1624990_at:400:207; Interrogation_Position=3524; Antisense; AAGCTCCTTAGTTGTAGTGCGAATC
>probe:Drosophila_2:1624990_at:701:365; Interrogation_Position=3544; Antisense; GAATCATTCAAACCTCTCAAGCGAG
>probe:Drosophila_2:1624990_at:517:121; Interrogation_Position=3563; Antisense; AGCGAGCTTCGAACTGACAATCATT
>probe:Drosophila_2:1624990_at:36:657; Interrogation_Position=3650; Antisense; TAATGCTTATATATGCTAGGCCCAA
>probe:Drosophila_2:1624990_at:304:679; Interrogation_Position=3666; Antisense; TAGGCCCAATCGATCACAGACACAG

Paste this into a BLAST search page for me
CTTAGCTCAAAACTTAGCACCGCTCAGCACCGCTCATAATCTAGTTAGTAATGGAGAATGGACGCCCTTCCCCGGGGACTTTCCGCCATAGAGCTGGACTGAGCTGGACTCCTCTGTGAAGGGATATACCTACACCTAACTATATTGCCTATTGCCTATGTAAGTGTGCGCACTTAGACTACTCTGGACACGTCGACATATTTCAGCTTAAGACTCGGAACTCGGAAGCTCCTTAGTTGTAGTGCGAATCGAATCATTCAAACCTCTCAAGCGAGAGCGAGCTTCGAACTGACAATCATTTAATGCTTATATATGCTAGGCCCAATAGGCCCAATCGATCACAGACACAG

Full Affymetrix probeset data:

Annotations for 1624990_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720