FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625010_a_at:

>probe:Drosophila_2:1625010_a_at:197:385; Interrogation_Position=1012; Antisense; GAACTCGTCATGGTGGCTCGGATAA
>probe:Drosophila_2:1625010_a_at:228:501; Interrogation_Position=1141; Antisense; GTCGTCACCATCAACTACAAGCTTA
>probe:Drosophila_2:1625010_a_at:622:561; Interrogation_Position=1182; Antisense; GGAACTGAATACCTCGCTGGTCAAT
>probe:Drosophila_2:1625010_a_at:534:657; Interrogation_Position=1206; Antisense; TAAGGTATTCTCGTCAGCTATTGGA
>probe:Drosophila_2:1625010_a_at:438:563; Interrogation_Position=1228; Antisense; GGAAGCCTGCTGATTCTCATTCAAA
>probe:Drosophila_2:1625010_a_at:143:243; Interrogation_Position=706; Antisense; AATATGCTGCAGTCACCTGTCCAGA
>probe:Drosophila_2:1625010_a_at:409:99; Interrogation_Position=728; Antisense; AGATGAATCTCCATAAGCCCTACTA
>probe:Drosophila_2:1625010_a_at:593:715; Interrogation_Position=766; Antisense; TTCTGCGAGTTAGCCGATCTTCTGG
>probe:Drosophila_2:1625010_a_at:386:627; Interrogation_Position=819; Antisense; TGCCAGCCGCTCAAAGAATTACCTT
>probe:Drosophila_2:1625010_a_at:690:361; Interrogation_Position=834; Antisense; GAATTACCTTCGGTTCACGGACTGG
>probe:Drosophila_2:1625010_a_at:350:555; Interrogation_Position=852; Antisense; GGACTGGTCCATGGTGCTATCGATG
>probe:Drosophila_2:1625010_a_at:666:379; Interrogation_Position=882; Antisense; GAACCTTCTCGGTATCACCATGGGA
>probe:Drosophila_2:1625010_a_at:604:693; Interrogation_Position=957; Antisense; TTTCGATCTCTTTCTGGCCATTGTT
>probe:Drosophila_2:1625010_a_at:55:275; Interrogation_Position=975; Antisense; CATTGTTCTGGTCGTATTTCTGGCT

Paste this into a BLAST search page for me
GAACTCGTCATGGTGGCTCGGATAAGTCGTCACCATCAACTACAAGCTTAGGAACTGAATACCTCGCTGGTCAATTAAGGTATTCTCGTCAGCTATTGGAGGAAGCCTGCTGATTCTCATTCAAAAATATGCTGCAGTCACCTGTCCAGAAGATGAATCTCCATAAGCCCTACTATTCTGCGAGTTAGCCGATCTTCTGGTGCCAGCCGCTCAAAGAATTACCTTGAATTACCTTCGGTTCACGGACTGGGGACTGGTCCATGGTGCTATCGATGGAACCTTCTCGGTATCACCATGGGATTTCGATCTCTTTCTGGCCATTGTTCATTGTTCTGGTCGTATTTCTGGCT

Full Affymetrix probeset data:

Annotations for 1625010_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720