FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625012_s_at:

>probe:Drosophila_2:1625012_s_at:42:85; Interrogation_Position=1258; Antisense; AGTGGGCCGAATTCGATCAGGATCA
>probe:Drosophila_2:1625012_s_at:242:385; Interrogation_Position=1367; Antisense; GAACTTTGTGCCCATTGACCTATCC
>probe:Drosophila_2:1625012_s_at:254:413; Interrogation_Position=1383; Antisense; GACCTATCCAACGATATAGCCGTCA
>probe:Drosophila_2:1625012_s_at:488:27; Interrogation_Position=1398; Antisense; ATAGCCGTCAACGATTTGGCTGCCG
>probe:Drosophila_2:1625012_s_at:630:265; Interrogation_Position=1423; Antisense; CAGATCCCAATTTTCCCATCAATGA
>probe:Drosophila_2:1625012_s_at:347:97; Interrogation_Position=1448; Antisense; AGATGCCGAGTTCATTGTGCACCCA
>probe:Drosophila_2:1625012_s_at:574:3; Interrogation_Position=1461; Antisense; ATTGTGCACCCAGCTGTAATCAGAA
>probe:Drosophila_2:1625012_s_at:634:49; Interrogation_Position=1488; Antisense; ATGCCTATGTTCGAGAAGCTTTCTT
>probe:Drosophila_2:1625012_s_at:606:207; Interrogation_Position=1503; Antisense; AAGCTTTCTTTAGGAGAGCCTGCGA
>probe:Drosophila_2:1625012_s_at:410:229; Interrogation_Position=1528; Antisense; AATGAGGTTTCTAAGTCTCTCCCAC
>probe:Drosophila_2:1625012_s_at:450:219; Interrogation_Position=1540; Antisense; AAGTCTCTCCCACTAGTCTAGGCAT
>probe:Drosophila_2:1625012_s_at:407:569; Interrogation_Position=1560; Antisense; GGCATTTTCTTTTAGTCTTAACTCA
>probe:Drosophila_2:1625012_s_at:184:449; Interrogation_Position=1621; Antisense; GATCCAAAGAAATCGGCGCTCATTT
>probe:Drosophila_2:1625012_s_at:263:577; Interrogation_Position=1635; Antisense; GGCGCTCATTTCATCCGTAATTTAT

Paste this into a BLAST search page for me
AGTGGGCCGAATTCGATCAGGATCAGAACTTTGTGCCCATTGACCTATCCGACCTATCCAACGATATAGCCGTCAATAGCCGTCAACGATTTGGCTGCCGCAGATCCCAATTTTCCCATCAATGAAGATGCCGAGTTCATTGTGCACCCAATTGTGCACCCAGCTGTAATCAGAAATGCCTATGTTCGAGAAGCTTTCTTAAGCTTTCTTTAGGAGAGCCTGCGAAATGAGGTTTCTAAGTCTCTCCCACAAGTCTCTCCCACTAGTCTAGGCATGGCATTTTCTTTTAGTCTTAACTCAGATCCAAAGAAATCGGCGCTCATTTGGCGCTCATTTCATCCGTAATTTAT

Full Affymetrix probeset data:

Annotations for 1625012_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720