FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625022_a_at:

>probe:Drosophila_2:1625022_a_at:423:725; Interrogation_Position=1611; Antisense; TTGAGGTCACCCTTAAACAGCATGA
>probe:Drosophila_2:1625022_a_at:258:43; Interrogation_Position=1655; Antisense; ATCGTTCCCCAATCGGATGTCTATT
>probe:Drosophila_2:1625022_a_at:336:443; Interrogation_Position=1670; Antisense; GATGTCTATTACACAGGCGTCGATG
>probe:Drosophila_2:1625022_a_at:212:329; Interrogation_Position=1686; Antisense; GCGTCGATGCACTACGATCTGAGTT
>probe:Drosophila_2:1625022_a_at:473:59; Interrogation_Position=1737; Antisense; ATGATTTCCCAGTGGTTCTCGATTG
>probe:Drosophila_2:1625022_a_at:171:7; Interrogation_Position=1758; Antisense; ATTGCGCACGCTTTATGCAGTTCGA
>probe:Drosophila_2:1625022_a_at:646:93; Interrogation_Position=1776; Antisense; AGTTCGATGCCACCTTCAGTGAGAT
>probe:Drosophila_2:1625022_a_at:655:715; Interrogation_Position=1907; Antisense; TTCTGCCAGGAGGATAGCCAGCTTT
>probe:Drosophila_2:1625022_a_at:410:117; Interrogation_Position=1926; Antisense; AGCTTTCGAGTCATCTGCAGGTGGA
>probe:Drosophila_2:1625022_a_at:333:27; Interrogation_Position=1981; Antisense; ATAGCCAACTTCCTATCTGATGTCG
>probe:Drosophila_2:1625022_a_at:228:719; Interrogation_Position=2011; Antisense; TTCCAGTCTGTTTGATCCGGTTATG
>probe:Drosophila_2:1625022_a_at:384:415; Interrogation_Position=2035; Antisense; GAGCGAACGTCACAGCATTTTTATC
>probe:Drosophila_2:1625022_a_at:124:401; Interrogation_Position=2064; Antisense; GACTTGTTACCGCTTGACGTTCGCA
>probe:Drosophila_2:1625022_a_at:634:353; Interrogation_Position=2107; Antisense; GCAGCGCCAGCAGTTAGTTAGTTAA

Paste this into a BLAST search page for me
TTGAGGTCACCCTTAAACAGCATGAATCGTTCCCCAATCGGATGTCTATTGATGTCTATTACACAGGCGTCGATGGCGTCGATGCACTACGATCTGAGTTATGATTTCCCAGTGGTTCTCGATTGATTGCGCACGCTTTATGCAGTTCGAAGTTCGATGCCACCTTCAGTGAGATTTCTGCCAGGAGGATAGCCAGCTTTAGCTTTCGAGTCATCTGCAGGTGGAATAGCCAACTTCCTATCTGATGTCGTTCCAGTCTGTTTGATCCGGTTATGGAGCGAACGTCACAGCATTTTTATCGACTTGTTACCGCTTGACGTTCGCAGCAGCGCCAGCAGTTAGTTAGTTAA

Full Affymetrix probeset data:

Annotations for 1625022_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720