FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625035_at:

>probe:Drosophila_2:1625035_at:204:655; Interrogation_Position=3365; Antisense; TAATTTTTATATTTCCACTCAGGCA
>probe:Drosophila_2:1625035_at:668:699; Interrogation_Position=3485; Antisense; TTTTTTGCTTCTGTTGCCGAGGCAA
>probe:Drosophila_2:1625035_at:707:303; Interrogation_Position=3501; Antisense; CCGAGGCAACTTTTGGCATTCTTGT
>probe:Drosophila_2:1625035_at:207:571; Interrogation_Position=3515; Antisense; GGCATTCTTGTGTGCTTATAACAAA
>probe:Drosophila_2:1625035_at:307:339; Interrogation_Position=3543; Antisense; GCTCTTAAAGCACTGTTTCACTCGG
>probe:Drosophila_2:1625035_at:149:479; Interrogation_Position=3557; Antisense; GTTTCACTCGGCAGCCAGATTTATT
>probe:Drosophila_2:1625035_at:244:567; Interrogation_Position=3566; Antisense; GGCAGCCAGATTTATTTTATGTTTC
>probe:Drosophila_2:1625035_at:697:115; Interrogation_Position=3607; Antisense; AGCTTGACATTTTGCATTCTTCTTG
>probe:Drosophila_2:1625035_at:369:661; Interrogation_Position=3655; Antisense; TAAACTAAACCCCATACGGCTGGCA
>probe:Drosophila_2:1625035_at:234:289; Interrogation_Position=3698; Antisense; CGGAAAATTCCTTAGCTGTAGCGAA
>probe:Drosophila_2:1625035_at:33:287; Interrogation_Position=3713; Antisense; CTGTAGCGAAGTCCTTTGTGCCAAA
>probe:Drosophila_2:1625035_at:655:703; Interrogation_Position=3764; Antisense; TTATTTCTTCTGAACTTCGAGCAAT
>probe:Drosophila_2:1625035_at:482:481; Interrogation_Position=3822; Antisense; GTATTTACGCTTTTCACCAATGTTT
>probe:Drosophila_2:1625035_at:48:31; Interrogation_Position=3868; Antisense; ATAAGATTATTGAAGCCACGTTACA

Paste this into a BLAST search page for me
TAATTTTTATATTTCCACTCAGGCATTTTTTGCTTCTGTTGCCGAGGCAACCGAGGCAACTTTTGGCATTCTTGTGGCATTCTTGTGTGCTTATAACAAAGCTCTTAAAGCACTGTTTCACTCGGGTTTCACTCGGCAGCCAGATTTATTGGCAGCCAGATTTATTTTATGTTTCAGCTTGACATTTTGCATTCTTCTTGTAAACTAAACCCCATACGGCTGGCACGGAAAATTCCTTAGCTGTAGCGAACTGTAGCGAAGTCCTTTGTGCCAAATTATTTCTTCTGAACTTCGAGCAATGTATTTACGCTTTTCACCAATGTTTATAAGATTATTGAAGCCACGTTACA

Full Affymetrix probeset data:

Annotations for 1625035_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720