FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625040_a_at:

>probe:Drosophila_2:1625040_a_at:204:189; Interrogation_Position=1386; Antisense; AACAGCATCTGTTCCCAAGAGCGGA
>probe:Drosophila_2:1625040_a_at:176:373; Interrogation_Position=1419; Antisense; GAAGTCCGGCGAGGATACACCTAAA
>probe:Drosophila_2:1625040_a_at:145:455; Interrogation_Position=1432; Antisense; GATACACCTAAATCCCAGGCAGCGG
>probe:Drosophila_2:1625040_a_at:667:73; Interrogation_Position=1477; Antisense; AGGACGCGGCAGAAACCCAGTCGAG
>probe:Drosophila_2:1625040_a_at:371:109; Interrogation_Position=1568; Antisense; AGAAGTTGCTGCTCCATCCGGATTT
>probe:Drosophila_2:1625040_a_at:449:331; Interrogation_Position=1600; Antisense; GCGGACACACACACGGAGAGCATCT
>probe:Drosophila_2:1625040_a_at:670:435; Interrogation_Position=1639; Antisense; GAGGCGGTGGAGTTTCTCAACAAAC
>probe:Drosophila_2:1625040_a_at:544:177; Interrogation_Position=1660; Antisense; AAACGGCAGGAGTTCTGGCGCCAAC
>probe:Drosophila_2:1625040_a_at:80:611; Interrogation_Position=1728; Antisense; TGACGCTCTGCCCAAATGGTTCTAG
>probe:Drosophila_2:1625040_a_at:91:169; Interrogation_Position=1741; Antisense; AAATGGTTCTAGTCCATCCAGCTGC
>probe:Drosophila_2:1625040_a_at:253:119; Interrogation_Position=1760; Antisense; AGCTGCCCAATACTACTGACTTGTT
>probe:Drosophila_2:1625040_a_at:553:645; Interrogation_Position=1784; Antisense; TCAGCTCCCGGTGTTAAGTTTCTGT
>probe:Drosophila_2:1625040_a_at:277:11; Interrogation_Position=1906; Antisense; ATTAACTTCCAATGCATTTTGCGAA
>probe:Drosophila_2:1625040_a_at:261:113; Interrogation_Position=1942; Antisense; AGCAGCGACTACGACGGTCCAACTT

Paste this into a BLAST search page for me
AACAGCATCTGTTCCCAAGAGCGGAGAAGTCCGGCGAGGATACACCTAAAGATACACCTAAATCCCAGGCAGCGGAGGACGCGGCAGAAACCCAGTCGAGAGAAGTTGCTGCTCCATCCGGATTTGCGGACACACACACGGAGAGCATCTGAGGCGGTGGAGTTTCTCAACAAACAAACGGCAGGAGTTCTGGCGCCAACTGACGCTCTGCCCAAATGGTTCTAGAAATGGTTCTAGTCCATCCAGCTGCAGCTGCCCAATACTACTGACTTGTTTCAGCTCCCGGTGTTAAGTTTCTGTATTAACTTCCAATGCATTTTGCGAAAGCAGCGACTACGACGGTCCAACTT

Full Affymetrix probeset data:

Annotations for 1625040_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720