FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625071_a_at:

>probe:Drosophila_2:1625071_a_at:647:687; Interrogation_Position=1703; Antisense; TATATAACTTAACCATCGCCACCAC
>probe:Drosophila_2:1625071_a_at:337:129; Interrogation_Position=1723; Antisense; ACCACCACAACTTTCTGCTTATGAA
>probe:Drosophila_2:1625071_a_at:481:147; Interrogation_Position=1747; Antisense; ACTATCAGCGATATAAACCACCCAA
>probe:Drosophila_2:1625071_a_at:583:301; Interrogation_Position=1828; Antisense; CCCAGTGTTTCTAGTTAATGCGTTT
>probe:Drosophila_2:1625071_a_at:84:657; Interrogation_Position=1843; Antisense; TAATGCGTTTTGAAGCTTCCAGGAT
>probe:Drosophila_2:1625071_a_at:9:541; Interrogation_Position=1864; Antisense; GGATGATACGCCTCCCCGGGAAATA
>probe:Drosophila_2:1625071_a_at:608:653; Interrogation_Position=1915; Antisense; TAAGGTGCCCATAACCACTAGTACC
>probe:Drosophila_2:1625071_a_at:714:275; Interrogation_Position=1932; Antisense; CTAGTACCTAGGCTGATCGGAGGAA
>probe:Drosophila_2:1625071_a_at:124:149; Interrogation_Position=1988; Antisense; ACTATTACTCAGAACTCAACACTTG
>probe:Drosophila_2:1625071_a_at:102:653; Interrogation_Position=2003; Antisense; TCAACACTTGACACTCGACACGAGC
>probe:Drosophila_2:1625071_a_at:190:135; Interrogation_Position=2043; Antisense; ACGCACACTGCAATCCATTTCAAAG
>probe:Drosophila_2:1625071_a_at:684:49; Interrogation_Position=2091; Antisense; ATGCAAATCGAATCTTTACTTCAGT
>probe:Drosophila_2:1625071_a_at:287:481; Interrogation_Position=2114; Antisense; GTATATTTTAAGCTACACACGGCAA
>probe:Drosophila_2:1625071_a_at:625:659; Interrogation_Position=2162; Antisense; TAACCCGGTCAGGAATATTAACAAG

Paste this into a BLAST search page for me
TATATAACTTAACCATCGCCACCACACCACCACAACTTTCTGCTTATGAAACTATCAGCGATATAAACCACCCAACCCAGTGTTTCTAGTTAATGCGTTTTAATGCGTTTTGAAGCTTCCAGGATGGATGATACGCCTCCCCGGGAAATATAAGGTGCCCATAACCACTAGTACCCTAGTACCTAGGCTGATCGGAGGAAACTATTACTCAGAACTCAACACTTGTCAACACTTGACACTCGACACGAGCACGCACACTGCAATCCATTTCAAAGATGCAAATCGAATCTTTACTTCAGTGTATATTTTAAGCTACACACGGCAATAACCCGGTCAGGAATATTAACAAG

Full Affymetrix probeset data:

Annotations for 1625071_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720