FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625204_a_at:

>probe:Drosophila_2:1625204_a_at:336:325; Interrogation_Position=2969; Antisense; GCGAGTTGACCTTCAATCTGCTGGT
>probe:Drosophila_2:1625204_a_at:540:193; Interrogation_Position=3000; Antisense; AACTCTGATTTGCATTGACCGTCCG
>probe:Drosophila_2:1625204_a_at:225:553; Interrogation_Position=3045; Antisense; GGAGCTTTTGTGCATTGTGGCCACC
>probe:Drosophila_2:1625204_a_at:328:595; Interrogation_Position=3060; Antisense; TGTGGCCACCATTCTTAATCGTAAC
>probe:Drosophila_2:1625204_a_at:39:205; Interrogation_Position=3104; Antisense; AAGCTCTAGACTTGGACGGCATCTT
>probe:Drosophila_2:1625204_a_at:59:545; Interrogation_Position=3210; Antisense; GGATCTCAAGGCTTTCTATTCGTTG
>probe:Drosophila_2:1625204_a_at:354:423; Interrogation_Position=3244; Antisense; GAGACCACGGGCTATTTGGCTCGCG
>probe:Drosophila_2:1625204_a_at:116:323; Interrogation_Position=3266; Antisense; GCGCCGCGGTCAACAAGGTTTTGCA
>probe:Drosophila_2:1625204_a_at:440:79; Interrogation_Position=3281; Antisense; AGGTTTTGCAGGGTGGCATCTTCTC
>probe:Drosophila_2:1625204_a_at:169:441; Interrogation_Position=3331; Antisense; GATGGCGATCGTTTGCACGACGACA
>probe:Drosophila_2:1625204_a_at:374:21; Interrogation_Position=3418; Antisense; ATATTTTCGTAGTACTGACCCACCA
>probe:Drosophila_2:1625204_a_at:592:609; Interrogation_Position=3433; Antisense; TGACCCACCATTAGCTCGAATGTTG
>probe:Drosophila_2:1625204_a_at:30:277; Interrogation_Position=3479; Antisense; CTAATTTAACTTGTCTCTCTCTGTG
>probe:Drosophila_2:1625204_a_at:338:635; Interrogation_Position=3508; Antisense; TCGCCGTTCGCCTAGTTCTTAATTA

Paste this into a BLAST search page for me
GCGAGTTGACCTTCAATCTGCTGGTAACTCTGATTTGCATTGACCGTCCGGGAGCTTTTGTGCATTGTGGCCACCTGTGGCCACCATTCTTAATCGTAACAAGCTCTAGACTTGGACGGCATCTTGGATCTCAAGGCTTTCTATTCGTTGGAGACCACGGGCTATTTGGCTCGCGGCGCCGCGGTCAACAAGGTTTTGCAAGGTTTTGCAGGGTGGCATCTTCTCGATGGCGATCGTTTGCACGACGACAATATTTTCGTAGTACTGACCCACCATGACCCACCATTAGCTCGAATGTTGCTAATTTAACTTGTCTCTCTCTGTGTCGCCGTTCGCCTAGTTCTTAATTA

Full Affymetrix probeset data:

Annotations for 1625204_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720