FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625223_a_at:

>probe:Drosophila_2:1625223_a_at:343:171; Interrogation_Position=1084; Antisense; AAAGTGCTATGACCGATTTCCAAAC
>probe:Drosophila_2:1625223_a_at:645:353; Interrogation_Position=1128; Antisense; GCACCGCCCACGAGATGACAATGAA
>probe:Drosophila_2:1625223_a_at:249:131; Interrogation_Position=1160; Antisense; ACCTAATGCCTTGGAGCGAGTCTCA
>probe:Drosophila_2:1625223_a_at:525:431; Interrogation_Position=1177; Antisense; GAGTCTCAGATCCACACCAAACAGT
>probe:Drosophila_2:1625223_a_at:688:187; Interrogation_Position=1196; Antisense; AACAGTGCCTTTGTCGTTGTAGACC
>probe:Drosophila_2:1625223_a_at:625:303; Interrogation_Position=1220; Antisense; CCGCTTTCACTACCATTTTTAACAT
>probe:Drosophila_2:1625223_a_at:119:147; Interrogation_Position=1267; Antisense; ACTAAAACCTCTTGTGCATGTCCTT
>probe:Drosophila_2:1625223_a_at:548:617; Interrogation_Position=1281; Antisense; TGCATGTCCTTTCCGTCTGTTGTAA
>probe:Drosophila_2:1625223_a_at:725:499; Interrogation_Position=1295; Antisense; GTCTGTTGTAATCCGGTTGTGTGTA
>probe:Drosophila_2:1625223_a_at:603:103; Interrogation_Position=903; Antisense; AGACGCACTATCATCAGCTCTTTGG
>probe:Drosophila_2:1625223_a_at:605:117; Interrogation_Position=918; Antisense; AGCTCTTTGGCAACCTGTGCTTCGT
>probe:Drosophila_2:1625223_a_at:625:591; Interrogation_Position=933; Antisense; TGTGCTTCGTCTGCAACCAGGTTAT
>probe:Drosophila_2:1625223_a_at:614:573; Interrogation_Position=962; Antisense; GGCGATGTTTTCACTGCCTTGAACA
>probe:Drosophila_2:1625223_a_at:405:725; Interrogation_Position=980; Antisense; TTGAACAAGGCCTGGTGTGTGCACC

Paste this into a BLAST search page for me
AAAGTGCTATGACCGATTTCCAAACGCACCGCCCACGAGATGACAATGAAACCTAATGCCTTGGAGCGAGTCTCAGAGTCTCAGATCCACACCAAACAGTAACAGTGCCTTTGTCGTTGTAGACCCCGCTTTCACTACCATTTTTAACATACTAAAACCTCTTGTGCATGTCCTTTGCATGTCCTTTCCGTCTGTTGTAAGTCTGTTGTAATCCGGTTGTGTGTAAGACGCACTATCATCAGCTCTTTGGAGCTCTTTGGCAACCTGTGCTTCGTTGTGCTTCGTCTGCAACCAGGTTATGGCGATGTTTTCACTGCCTTGAACATTGAACAAGGCCTGGTGTGTGCACC

Full Affymetrix probeset data:

Annotations for 1625223_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720