FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625231_at:

>probe:Drosophila_2:1625231_at:456:401; Interrogation_Position=1011; Antisense; GACATTTTTTCTGTACGGTGGCAAT
>probe:Drosophila_2:1625231_at:176:209; Interrogation_Position=1069; Antisense; AAGCATCGTGTATTTTAGTCTCTGC
>probe:Drosophila_2:1625231_at:605:693; Interrogation_Position=1082; Antisense; TTTAGTCTCTGCGTTGGTTTTCCAC
>probe:Drosophila_2:1625231_at:539:589; Interrogation_Position=1096; Antisense; TGGTTTTCCACGTTTTTATATCACT
>probe:Drosophila_2:1625231_at:455:527; Interrogation_Position=1164; Antisense; GGGAGTTCCACCACCTATGTACAAA
>probe:Drosophila_2:1625231_at:188:295; Interrogation_Position=1196; Antisense; CGAAATATTTTACCGAGCGCCCATT
>probe:Drosophila_2:1625231_at:2:133; Interrogation_Position=1207; Antisense; ACCGAGCGCCCATTAGAATTGTAAT
>probe:Drosophila_2:1625231_at:350:425; Interrogation_Position=688; Antisense; GAGATGGGCGAATGTACCCGCTCCG
>probe:Drosophila_2:1625231_at:175:343; Interrogation_Position=713; Antisense; GCTTCTGCAACTTCATGCACTTGAA
>probe:Drosophila_2:1625231_at:352:725; Interrogation_Position=733; Antisense; TTGAAGCCCATCTCGCGTGAGCTGC
>probe:Drosophila_2:1625231_at:714:511; Interrogation_Position=749; Antisense; GTGAGCTGCGAAGGTACCTCTACTC
>probe:Drosophila_2:1625231_at:538:515; Interrogation_Position=878; Antisense; GTGTCGGCGGAGGAAACTACTTGAA
>probe:Drosophila_2:1625231_at:140:137; Interrogation_Position=905; Antisense; ACGAGCGGGACAACATGCGTGGCAA
>probe:Drosophila_2:1625231_at:270:199; Interrogation_Position=940; Antisense; AACGATCGCGATCGCCGCAAAGGTG

Paste this into a BLAST search page for me
GACATTTTTTCTGTACGGTGGCAATAAGCATCGTGTATTTTAGTCTCTGCTTTAGTCTCTGCGTTGGTTTTCCACTGGTTTTCCACGTTTTTATATCACTGGGAGTTCCACCACCTATGTACAAACGAAATATTTTACCGAGCGCCCATTACCGAGCGCCCATTAGAATTGTAATGAGATGGGCGAATGTACCCGCTCCGGCTTCTGCAACTTCATGCACTTGAATTGAAGCCCATCTCGCGTGAGCTGCGTGAGCTGCGAAGGTACCTCTACTCGTGTCGGCGGAGGAAACTACTTGAAACGAGCGGGACAACATGCGTGGCAAAACGATCGCGATCGCCGCAAAGGTG

Full Affymetrix probeset data:

Annotations for 1625231_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720