FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625243_a_at:

>probe:Drosophila_2:1625243_a_at:309:25; Interrogation_Position=8212; Antisense; ATATGTTTGCCCTGAATGCCAACGC
>probe:Drosophila_2:1625243_a_at:202:359; Interrogation_Position=8235; Antisense; GCAAAAACGATGCTAACGCTGCAAA
>probe:Drosophila_2:1625243_a_at:619:209; Interrogation_Position=8264; Antisense; AAGAAACTGACTTCAAATGACGTTG
>probe:Drosophila_2:1625243_a_at:207:473; Interrogation_Position=8320; Antisense; GTTACACAAAAGTGCTTGGCCATTT
>probe:Drosophila_2:1625243_a_at:234:575; Interrogation_Position=8336; Antisense; TGGCCATTTATGGAACCGGTTGATC
>probe:Drosophila_2:1625243_a_at:398:467; Interrogation_Position=8354; Antisense; GTTGATCCGAAGGAAGCACCCGATT
>probe:Drosophila_2:1625243_a_at:394:225; Interrogation_Position=8363; Antisense; AAGGAAGCACCCGATTATTACAAAG
>probe:Drosophila_2:1625243_a_at:186:211; Interrogation_Position=8394; Antisense; AAGAGCCAATGGATCTCAAACGGAT
>probe:Drosophila_2:1625243_a_at:649:193; Interrogation_Position=8427; Antisense; AACTCGAATCAAACACCTATACCAA
>probe:Drosophila_2:1625243_a_at:282:395; Interrogation_Position=8489; Antisense; GACAACTGCCGTTACTATAACCCAA
>probe:Drosophila_2:1625243_a_at:335:365; Interrogation_Position=8516; Antisense; GAATCATCCTTTTATAAGTGTGCTG
>probe:Drosophila_2:1625243_a_at:487:507; Interrogation_Position=8535; Antisense; GTGCTGAAGCACTAGAGTCATACTT
>probe:Drosophila_2:1625243_a_at:195:139; Interrogation_Position=8683; Antisense; ACGTCCTTCAGTTATGTATTCTTAT
>probe:Drosophila_2:1625243_a_at:567:413; Interrogation_Position=8785; Antisense; GACCATATTTAGTAACGTACACCAG

Paste this into a BLAST search page for me
ATATGTTTGCCCTGAATGCCAACGCGCAAAAACGATGCTAACGCTGCAAAAAGAAACTGACTTCAAATGACGTTGGTTACACAAAAGTGCTTGGCCATTTTGGCCATTTATGGAACCGGTTGATCGTTGATCCGAAGGAAGCACCCGATTAAGGAAGCACCCGATTATTACAAAGAAGAGCCAATGGATCTCAAACGGATAACTCGAATCAAACACCTATACCAAGACAACTGCCGTTACTATAACCCAAGAATCATCCTTTTATAAGTGTGCTGGTGCTGAAGCACTAGAGTCATACTTACGTCCTTCAGTTATGTATTCTTATGACCATATTTAGTAACGTACACCAG

Full Affymetrix probeset data:

Annotations for 1625243_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720