FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625358_s_at:

>probe:Drosophila_2:1625358_s_at:382:487; Interrogation_Position=1664; Antisense; GTAGCTACTGGTTCATGGACCGCGA
>probe:Drosophila_2:1625358_s_at:269:429; Interrogation_Position=1717; Antisense; GAGTTCCTGGAGTACGGCGAGCACA
>probe:Drosophila_2:1625358_s_at:471:67; Interrogation_Position=1742; Antisense; ATGGCAATCTGTACGGCACGCATTT
>probe:Drosophila_2:1625358_s_at:358:355; Interrogation_Position=1757; Antisense; GCACGCATTTGCAGTCCATCAAGGA
>probe:Drosophila_2:1625358_s_at:229:465; Interrogation_Position=1813; Antisense; GATTGTGCACCGAATGCCCTGAAGA
>probe:Drosophila_2:1625358_s_at:673:311; Interrogation_Position=1850; Antisense; GCCAGGAACTGATGCCTTTTGTCAT
>probe:Drosophila_2:1625358_s_at:344:703; Interrogation_Position=1866; Antisense; TTTTGTCATCTTTGTGGCAGCGCCT
>probe:Drosophila_2:1625358_s_at:254:339; Interrogation_Position=1902; Antisense; GCTCAAGACCATCTATGCGGATCGC
>probe:Drosophila_2:1625358_s_at:580:289; Interrogation_Position=1945; Antisense; CGGAATTTATCTGCCACCCTAGTAG
>probe:Drosophila_2:1625358_s_at:666:705; Interrogation_Position=1975; Antisense; TTAGATCTCTGCCTGAATACCCAAA
>probe:Drosophila_2:1625358_s_at:518:149; Interrogation_Position=2011; Antisense; ACATTCGCTTTCTATGACTTTTCCG
>probe:Drosophila_2:1625358_s_at:702:349; Interrogation_Position=2072; Antisense; GCAGCTTCGTCCAGCGCAAGTATGA
>probe:Drosophila_2:1625358_s_at:534:71; Interrogation_Position=2126; Antisense; AGGACTTCGATGAGACGTTCCGCCA
>probe:Drosophila_2:1625358_s_at:385:535; Interrogation_Position=2193; Antisense; GGTGCCTGTCAACTGGATCTACTAG

Paste this into a BLAST search page for me
GTAGCTACTGGTTCATGGACCGCGAGAGTTCCTGGAGTACGGCGAGCACAATGGCAATCTGTACGGCACGCATTTGCACGCATTTGCAGTCCATCAAGGAGATTGTGCACCGAATGCCCTGAAGAGCCAGGAACTGATGCCTTTTGTCATTTTTGTCATCTTTGTGGCAGCGCCTGCTCAAGACCATCTATGCGGATCGCCGGAATTTATCTGCCACCCTAGTAGTTAGATCTCTGCCTGAATACCCAAAACATTCGCTTTCTATGACTTTTCCGGCAGCTTCGTCCAGCGCAAGTATGAAGGACTTCGATGAGACGTTCCGCCAGGTGCCTGTCAACTGGATCTACTAG

Full Affymetrix probeset data:

Annotations for 1625358_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720