FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625442_a_at:

>probe:Drosophila_2:1625442_a_at:314:581; Interrogation_Position=2468; Antisense; TGGCGAGCTGCTGGCACATCTTTAC
>probe:Drosophila_2:1625442_a_at:321:151; Interrogation_Position=2483; Antisense; ACATCTTTACGCGTCCGGCGATCAG
>probe:Drosophila_2:1625442_a_at:396:503; Interrogation_Position=2495; Antisense; GTCCGGCGATCAGGCCCAGATGATG
>probe:Drosophila_2:1625442_a_at:192:427; Interrogation_Position=2523; Antisense; GAGTCGGCTGAATCGGCAACACGGC
>probe:Drosophila_2:1625442_a_at:432:167; Interrogation_Position=2554; Antisense; AAATGCTGCGCATGTACCGTGCTTG
>probe:Drosophila_2:1625442_a_at:76:489; Interrogation_Position=2567; Antisense; GTACCGTGCTTGCAAGGATGCATTA
>probe:Drosophila_2:1625442_a_at:83:511; Interrogation_Position=2602; Antisense; GTGACGTATCAATGGCCACCGTGTC
>probe:Drosophila_2:1625442_a_at:23:627; Interrogation_Position=2635; Antisense; TGCCACCGCCGGTTAAGAACGATTG
>probe:Drosophila_2:1625442_a_at:473:539; Interrogation_Position=2645; Antisense; GGTTAAGAACGATTGGCTGCCCAGC
>probe:Drosophila_2:1625442_a_at:111:71; Interrogation_Position=2667; Antisense; AGCGGCTTGGACAACCCACGTCTTT
>probe:Drosophila_2:1625442_a_at:354:711; Interrogation_Position=2690; Antisense; TTCTCCTCCAAGTCCGGGTGGCGTT
>probe:Drosophila_2:1625442_a_at:387:327; Interrogation_Position=2710; Antisense; GCGTTCGAGGAAAGCCAGGACCTCC
>probe:Drosophila_2:1625442_a_at:234:257; Interrogation_Position=2737; Antisense; CACAGAGCTCCTTGGGTGGACGGAA
>probe:Drosophila_2:1625442_a_at:423:721; Interrogation_Position=2748; Antisense; TTGGGTGGACGGAACCCACCATTGC

Paste this into a BLAST search page for me
TGGCGAGCTGCTGGCACATCTTTACACATCTTTACGCGTCCGGCGATCAGGTCCGGCGATCAGGCCCAGATGATGGAGTCGGCTGAATCGGCAACACGGCAAATGCTGCGCATGTACCGTGCTTGGTACCGTGCTTGCAAGGATGCATTAGTGACGTATCAATGGCCACCGTGTCTGCCACCGCCGGTTAAGAACGATTGGGTTAAGAACGATTGGCTGCCCAGCAGCGGCTTGGACAACCCACGTCTTTTTCTCCTCCAAGTCCGGGTGGCGTTGCGTTCGAGGAAAGCCAGGACCTCCCACAGAGCTCCTTGGGTGGACGGAATTGGGTGGACGGAACCCACCATTGC

Full Affymetrix probeset data:

Annotations for 1625442_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720