FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625470_s_at:

>probe:Drosophila_2:1625470_s_at:681:135; Interrogation_Position=1576; Antisense; ACGCAATGCACTGATGGACGCCATA
>probe:Drosophila_2:1625470_s_at:85:543; Interrogation_Position=1591; Antisense; GGACGCCATACGCAAGGGAACCCAG
>probe:Drosophila_2:1625470_s_at:32:395; Interrogation_Position=1621; Antisense; GAAAGTGGACACGACTGCTCTCAGC
>probe:Drosophila_2:1625470_s_at:242:619; Interrogation_Position=1636; Antisense; TGCTCTCAGCACTGGAAGTGGCGAC
>probe:Drosophila_2:1625470_s_at:642:221; Interrogation_Position=1651; Antisense; AAGTGGCGACTCACGCAGCGATTTA
>probe:Drosophila_2:1625470_s_at:723:371; Interrogation_Position=1678; Antisense; GAAGGATATCCGTCAGGGCACTGTT
>probe:Drosophila_2:1625470_s_at:33:357; Interrogation_Position=1695; Antisense; GCACTGTTTTGAAGCCGGCCAAGGA
>probe:Drosophila_2:1625470_s_at:669:113; Interrogation_Position=1756; Antisense; AGCAGGCACTGACGCATTGGCCGAT
>probe:Drosophila_2:1625470_s_at:225:3; Interrogation_Position=1771; Antisense; ATTGGCCGATGCACTGCGTCGAGCG
>probe:Drosophila_2:1625470_s_at:35:587; Interrogation_Position=1807; Antisense; TGGAAACGCCATCCACTCGGATGAG
>probe:Drosophila_2:1625470_s_at:412:561; Interrogation_Position=1875; Antisense; GGAACTACGAATGACACGATGCGAT
>probe:Drosophila_2:1625470_s_at:481:525; Interrogation_Position=1902; Antisense; GGGCAGGCAGACACTATTCCAAAAA
>probe:Drosophila_2:1625470_s_at:353:505; Interrogation_Position=1945; Antisense; GTGCTTTGGCATTTTGGTTTATCGT
>probe:Drosophila_2:1625470_s_at:105:681; Interrogation_Position=2081; Antisense; TATCAGCAATTACCCGTTTTCGTTT

Paste this into a BLAST search page for me
ACGCAATGCACTGATGGACGCCATAGGACGCCATACGCAAGGGAACCCAGGAAAGTGGACACGACTGCTCTCAGCTGCTCTCAGCACTGGAAGTGGCGACAAGTGGCGACTCACGCAGCGATTTAGAAGGATATCCGTCAGGGCACTGTTGCACTGTTTTGAAGCCGGCCAAGGAAGCAGGCACTGACGCATTGGCCGATATTGGCCGATGCACTGCGTCGAGCGTGGAAACGCCATCCACTCGGATGAGGGAACTACGAATGACACGATGCGATGGGCAGGCAGACACTATTCCAAAAAGTGCTTTGGCATTTTGGTTTATCGTTATCAGCAATTACCCGTTTTCGTTT

Full Affymetrix probeset data:

Annotations for 1625470_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720