FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625477_a_at:

>probe:Drosophila_2:1625477_a_at:9:607; Interrogation_Position=1524; Antisense; TGATGCCCGGCATTATGATCGGCGA
>probe:Drosophila_2:1625477_a_at:607:433; Interrogation_Position=1587; Antisense; GAGTGTTTGCCTCCATGAACGTCGC
>probe:Drosophila_2:1625477_a_at:256:299; Interrogation_Position=1609; Antisense; CGCTCTGTTCATCTTCGCGAAGAAG
>probe:Drosophila_2:1625477_a_at:365:325; Interrogation_Position=1625; Antisense; GCGAAGAAGTTTCCCGCTTTGCAGG
>probe:Drosophila_2:1625477_a_at:276:693; Interrogation_Position=1642; Antisense; TTTGCAGGCCATGCTCAAGATGCGC
>probe:Drosophila_2:1625477_a_at:141:699; Interrogation_Position=1712; Antisense; TTTATGTGCCTTTTCCAGCCGGAGA
>probe:Drosophila_2:1625477_a_at:599:551; Interrogation_Position=1753; Antisense; GGAGCACATCGAGGACTATTTCAAC
>probe:Drosophila_2:1625477_a_at:189:159; Interrogation_Position=1782; Antisense; ACAACTGGCTCTGGTTCCGGCGGGA
>probe:Drosophila_2:1625477_a_at:677:543; Interrogation_Position=1804; Antisense; GGATCGAGGCTACAAGACGGTCAAC
>probe:Drosophila_2:1625477_a_at:218:615; Interrogation_Position=1830; Antisense; TGCAGCCCCTGGAGCCATTGAAGGA
>probe:Drosophila_2:1625477_a_at:207:29; Interrogation_Position=1927; Antisense; ATACTCATAGTTCTAGCCGCAGTGC
>probe:Drosophila_2:1625477_a_at:257:675; Interrogation_Position=1965; Antisense; TAGACTCGCTCGATTTTCCAGTGAC
>probe:Drosophila_2:1625477_a_at:62:65; Interrogation_Position=1995; Antisense; ATGGGCCACTCCGACAGGGAATCTT
>probe:Drosophila_2:1625477_a_at:217:451; Interrogation_Position=2048; Antisense; GATCGCTATGCTTTAAATTGTGTCT

Paste this into a BLAST search page for me
TGATGCCCGGCATTATGATCGGCGAGAGTGTTTGCCTCCATGAACGTCGCCGCTCTGTTCATCTTCGCGAAGAAGGCGAAGAAGTTTCCCGCTTTGCAGGTTTGCAGGCCATGCTCAAGATGCGCTTTATGTGCCTTTTCCAGCCGGAGAGGAGCACATCGAGGACTATTTCAACACAACTGGCTCTGGTTCCGGCGGGAGGATCGAGGCTACAAGACGGTCAACTGCAGCCCCTGGAGCCATTGAAGGAATACTCATAGTTCTAGCCGCAGTGCTAGACTCGCTCGATTTTCCAGTGACATGGGCCACTCCGACAGGGAATCTTGATCGCTATGCTTTAAATTGTGTCT

Full Affymetrix probeset data:

Annotations for 1625477_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720