FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625542_a_at:

>probe:Drosophila_2:1625542_a_at:613:365; Interrogation_Position=1070; Antisense; GAATCGGTGACCAATTCCCTGGGCA
>probe:Drosophila_2:1625542_a_at:627:303; Interrogation_Position=1143; Antisense; CCAGTAATCCGGCAGCAGCTTTAAT
>probe:Drosophila_2:1625542_a_at:321:655; Interrogation_Position=1164; Antisense; TAATAGCTGAGGATGCAGCCCCACC
>probe:Drosophila_2:1625542_a_at:61:159; Interrogation_Position=1257; Antisense; ACAAATCTGAGAAATCCGACCGGAA
>probe:Drosophila_2:1625542_a_at:638:351; Interrogation_Position=1308; Antisense; GCAGCAAACGATCCAATCCCATGGA
>probe:Drosophila_2:1625542_a_at:403:637; Interrogation_Position=1377; Antisense; TCGATGAGGGCATCGCACTGGCCGA
>probe:Drosophila_2:1625542_a_at:189:409; Interrogation_Position=1403; Antisense; GACGATGACAACCAAGCGGCGGAAT
>probe:Drosophila_2:1625542_a_at:449:535; Interrogation_Position=1428; Antisense; GGTCCAAGTTGCGATGCACCAGCGA
>probe:Drosophila_2:1625542_a_at:555:159; Interrogation_Position=1491; Antisense; ACAAGGGACGTTGTGCGGATTATCC
>probe:Drosophila_2:1625542_a_at:437:703; Interrogation_Position=1510; Antisense; TTATCCGGGACTCGCCTTTGGCAGA
>probe:Drosophila_2:1625542_a_at:256:729; Interrogation_Position=1527; Antisense; TTGGCAGATCCATCTTCAGTTCGGA
>probe:Drosophila_2:1625542_a_at:567:37; Interrogation_Position=1538; Antisense; ATCTTCAGTTCGGACACCATGATGA
>probe:Drosophila_2:1625542_a_at:602:53; Interrogation_Position=1559; Antisense; ATGAAGTTCAACATCATCCGCAACG
>probe:Drosophila_2:1625542_a_at:291:199; Interrogation_Position=1580; Antisense; AACGAGCTGCACAACATCATGAACA

Paste this into a BLAST search page for me
GAATCGGTGACCAATTCCCTGGGCACCAGTAATCCGGCAGCAGCTTTAATTAATAGCTGAGGATGCAGCCCCACCACAAATCTGAGAAATCCGACCGGAAGCAGCAAACGATCCAATCCCATGGATCGATGAGGGCATCGCACTGGCCGAGACGATGACAACCAAGCGGCGGAATGGTCCAAGTTGCGATGCACCAGCGAACAAGGGACGTTGTGCGGATTATCCTTATCCGGGACTCGCCTTTGGCAGATTGGCAGATCCATCTTCAGTTCGGAATCTTCAGTTCGGACACCATGATGAATGAAGTTCAACATCATCCGCAACGAACGAGCTGCACAACATCATGAACA

Full Affymetrix probeset data:

Annotations for 1625542_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720