FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625561_s_at:

>probe:Drosophila_2:1625561_s_at:148:337; Interrogation_Position=4776; Antisense; GCTCGATCAGTAGTTATCTATACAT
>probe:Drosophila_2:1625561_s_at:445:693; Interrogation_Position=4876; Antisense; TTTGCGAGCAAAAGAATATCCCCAC
>probe:Drosophila_2:1625561_s_at:338:365; Interrogation_Position=4889; Antisense; GAATATCCCCACATGCATTTCAATT
>probe:Drosophila_2:1625561_s_at:2:19; Interrogation_Position=4916; Antisense; ATTTCATTATCCATTAACACTTGCA
>probe:Drosophila_2:1625561_s_at:680:659; Interrogation_Position=4930; Antisense; TAACACTTGCATTTGCTGTCCACAA
>probe:Drosophila_2:1625561_s_at:554:723; Interrogation_Position=4942; Antisense; TTGCTGTCCACAAGACTCTGGGTGT
>probe:Drosophila_2:1625561_s_at:329:429; Interrogation_Position=5081; Antisense; GAGTACAAATAACGTTCTGAAAGTG
>probe:Drosophila_2:1625561_s_at:41:365; Interrogation_Position=5152; Antisense; GAATACGTATGCAGCTTATTACATT
>probe:Drosophila_2:1625561_s_at:284:421; Interrogation_Position=5202; Antisense; GAGAGAATAACGTACAAATGTCACT
>probe:Drosophila_2:1625561_s_at:248:231; Interrogation_Position=5218; Antisense; AATGTCACTTAAACGGCTGTGGACC
>probe:Drosophila_2:1625561_s_at:135:177; Interrogation_Position=5228; Antisense; AAACGGCTGTGGACCGCGAGACTTT
>probe:Drosophila_2:1625561_s_at:101:521; Interrogation_Position=5236; Antisense; GTGGACCGCGAGACTTTCGATTATA
>probe:Drosophila_2:1625561_s_at:434:217; Interrogation_Position=5264; Antisense; AAGTTATATATTTTCAGTCCCACAA
>probe:Drosophila_2:1625561_s_at:693:687; Interrogation_Position=5270; Antisense; TATATTTTCAGTCCCACAATCGCAG

Paste this into a BLAST search page for me
GCTCGATCAGTAGTTATCTATACATTTTGCGAGCAAAAGAATATCCCCACGAATATCCCCACATGCATTTCAATTATTTCATTATCCATTAACACTTGCATAACACTTGCATTTGCTGTCCACAATTGCTGTCCACAAGACTCTGGGTGTGAGTACAAATAACGTTCTGAAAGTGGAATACGTATGCAGCTTATTACATTGAGAGAATAACGTACAAATGTCACTAATGTCACTTAAACGGCTGTGGACCAAACGGCTGTGGACCGCGAGACTTTGTGGACCGCGAGACTTTCGATTATAAAGTTATATATTTTCAGTCCCACAATATATTTTCAGTCCCACAATCGCAG

Full Affymetrix probeset data:

Annotations for 1625561_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720