FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625563_s_at:

>probe:Drosophila_2:1625563_s_at:378:411; Interrogation_Position=1323; Antisense; GACGCAGATGCGTCCGAGATCGGAA
>probe:Drosophila_2:1625563_s_at:718:55; Interrogation_Position=1349; Antisense; ATGACTATCAGAGTGCCAGGTCGCA
>probe:Drosophila_2:1625563_s_at:705:615; Interrogation_Position=1386; Antisense; TGCAGTTCCACTTCTGGAGGTGCAA
>probe:Drosophila_2:1625563_s_at:225:435; Interrogation_Position=1402; Antisense; GAGGTGCAAAGCCAGTCCCAGATTC
>probe:Drosophila_2:1625563_s_at:137:193; Interrogation_Position=1431; Antisense; AACTAGCTTGGCCTAATCCTGCGGG
>probe:Drosophila_2:1625563_s_at:314:235; Interrogation_Position=1445; Antisense; AATCCTGCGGGTAGCCAACAGATCA
>probe:Drosophila_2:1625563_s_at:154:453; Interrogation_Position=1465; Antisense; GATCAGCAATCTCAGGTTTATTTTT
>probe:Drosophila_2:1625563_s_at:108:411; Interrogation_Position=1570; Antisense; GACCCTCTAGTCGAGAGTCTTCGAT
>probe:Drosophila_2:1625563_s_at:333:23; Interrogation_Position=1612; Antisense; ATAGTTTTCACTATCCTAGCTTAGT
>probe:Drosophila_2:1625563_s_at:23:675; Interrogation_Position=1628; Antisense; TAGCTTAGTGAACTCGTGCCTCGAT
>probe:Drosophila_2:1625563_s_at:199:7; Interrogation_Position=1709; Antisense; ATTGTTGCATACTCTTGGGCTTATA
>probe:Drosophila_2:1625563_s_at:79:25; Interrogation_Position=1753; Antisense; ATATGCCTGGTTAGGCCACATTGTC
>probe:Drosophila_2:1625563_s_at:347:257; Interrogation_Position=1769; Antisense; CACATTGTCCAGTCGATTCCTTTGA
>probe:Drosophila_2:1625563_s_at:709:461; Interrogation_Position=1783; Antisense; GATTCCTTTGACTATAACCTCTGGT

Paste this into a BLAST search page for me
GACGCAGATGCGTCCGAGATCGGAAATGACTATCAGAGTGCCAGGTCGCATGCAGTTCCACTTCTGGAGGTGCAAGAGGTGCAAAGCCAGTCCCAGATTCAACTAGCTTGGCCTAATCCTGCGGGAATCCTGCGGGTAGCCAACAGATCAGATCAGCAATCTCAGGTTTATTTTTGACCCTCTAGTCGAGAGTCTTCGATATAGTTTTCACTATCCTAGCTTAGTTAGCTTAGTGAACTCGTGCCTCGATATTGTTGCATACTCTTGGGCTTATAATATGCCTGGTTAGGCCACATTGTCCACATTGTCCAGTCGATTCCTTTGAGATTCCTTTGACTATAACCTCTGGT

Full Affymetrix probeset data:

Annotations for 1625563_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720