FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625590_a_at:

>probe:Drosophila_2:1625590_a_at:710:149; Interrogation_Position=1049; Antisense; ACATTCTGCCGGGTTGTGTAAGCTC
>probe:Drosophila_2:1625590_a_at:639:491; Interrogation_Position=1066; Antisense; GTAAGCTCGGTGTACTTTTTCTACG
>probe:Drosophila_2:1625590_a_at:502:487; Interrogation_Position=1077; Antisense; GTACTTTTTCTACGATCCGGACTAT
>probe:Drosophila_2:1625590_a_at:628:43; Interrogation_Position=1110; Antisense; ATCGCTTGGCACATATGGTTCACTC
>probe:Drosophila_2:1625590_a_at:45:249; Interrogation_Position=1140; Antisense; AATTGAATTGGTGCAGTCGCTCGCC
>probe:Drosophila_2:1625590_a_at:689:61; Interrogation_Position=1195; Antisense; ATGGGTTTCTACATACACTCCTGTC
>probe:Drosophila_2:1625590_a_at:453:631; Interrogation_Position=1213; Antisense; TCCTGTCCCAAAATGCGCTACAAGG
>probe:Drosophila_2:1625590_a_at:347:723; Interrogation_Position=1258; Antisense; TTGCTGTGCCCGGAGACCTATGAAT
>probe:Drosophila_2:1625590_a_at:595:103; Interrogation_Position=1271; Antisense; AGACCTATGAATGGCTACCGCTCAC
>probe:Drosophila_2:1625590_a_at:79:299; Interrogation_Position=1289; Antisense; CGCTCACCGATGTTATTCGTGCTAA
>probe:Drosophila_2:1625590_a_at:318:585; Interrogation_Position=1416; Antisense; TGGAAGAACCCGCACAGACTACAAG
>probe:Drosophila_2:1625590_a_at:132:665; Interrogation_Position=1435; Antisense; TACAAGCACTTTAGGCAGGCATCTG
>probe:Drosophila_2:1625590_a_at:351:555; Interrogation_Position=1464; Antisense; GGACCGTCTCCGATGACGATATCAT
>probe:Drosophila_2:1625590_a_at:256:621; Interrogation_Position=1522; Antisense; TGCTCGGCGCATGCTATACGTGAAG

Paste this into a BLAST search page for me
ACATTCTGCCGGGTTGTGTAAGCTCGTAAGCTCGGTGTACTTTTTCTACGGTACTTTTTCTACGATCCGGACTATATCGCTTGGCACATATGGTTCACTCAATTGAATTGGTGCAGTCGCTCGCCATGGGTTTCTACATACACTCCTGTCTCCTGTCCCAAAATGCGCTACAAGGTTGCTGTGCCCGGAGACCTATGAATAGACCTATGAATGGCTACCGCTCACCGCTCACCGATGTTATTCGTGCTAATGGAAGAACCCGCACAGACTACAAGTACAAGCACTTTAGGCAGGCATCTGGGACCGTCTCCGATGACGATATCATTGCTCGGCGCATGCTATACGTGAAG

Full Affymetrix probeset data:

Annotations for 1625590_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720