FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625600_a_at:

>probe:Drosophila_2:1625600_a_at:130:425; Interrogation_Position=1498; Antisense; GAGACATTTGAGCAACTGAGCGCCA
>probe:Drosophila_2:1625600_a_at:262:417; Interrogation_Position=1515; Antisense; GAGCGCCATGTACAAATACGCCCAG
>probe:Drosophila_2:1625600_a_at:405:239; Interrogation_Position=1529; Antisense; AATACGCCCAGGAGCCTACGAAGGA
>probe:Drosophila_2:1625600_a_at:562:371; Interrogation_Position=1548; Antisense; GAAGGATGCCAAACCCGAACAGAAA
>probe:Drosophila_2:1625600_a_at:158:205; Interrogation_Position=1588; Antisense; AAGCCAGTAGGTCACAGCGATATCT
>probe:Drosophila_2:1625600_a_at:228:409; Interrogation_Position=1690; Antisense; GACGAAATCTCCGACGTGGACGACG
>probe:Drosophila_2:1625600_a_at:95:521; Interrogation_Position=1705; Antisense; GTGGACGACGCCGATCTGATGAACC
>probe:Drosophila_2:1625600_a_at:217:395; Interrogation_Position=1740; Antisense; GAAATACGGTCGTCTGCCCGTCAAG
>probe:Drosophila_2:1625600_a_at:176:481; Interrogation_Position=1767; Antisense; GTTTGAGAGCGATCCGGACTCTGAC
>probe:Drosophila_2:1625600_a_at:585:411; Interrogation_Position=1792; Antisense; GACCCCAGCTGGACACGTAATTACT
>probe:Drosophila_2:1625600_a_at:348:165; Interrogation_Position=1825; Antisense; AAATCACCACGTCTGTCGATGACCA
>probe:Drosophila_2:1625600_a_at:433:629; Interrogation_Position=1856; Antisense; TCCATTCTCCATCCAACATATATTC
>probe:Drosophila_2:1625600_a_at:60:37; Interrogation_Position=1904; Antisense; ATCATAGGCCCAACACTACTTTAAG
>probe:Drosophila_2:1625600_a_at:729:99; Interrogation_Position=1935; Antisense; GACCAAAAACCGATCGCTTTACACA

Paste this into a BLAST search page for me
GAGACATTTGAGCAACTGAGCGCCAGAGCGCCATGTACAAATACGCCCAGAATACGCCCAGGAGCCTACGAAGGAGAAGGATGCCAAACCCGAACAGAAAAAGCCAGTAGGTCACAGCGATATCTGACGAAATCTCCGACGTGGACGACGGTGGACGACGCCGATCTGATGAACCGAAATACGGTCGTCTGCCCGTCAAGGTTTGAGAGCGATCCGGACTCTGACGACCCCAGCTGGACACGTAATTACTAAATCACCACGTCTGTCGATGACCATCCATTCTCCATCCAACATATATTCATCATAGGCCCAACACTACTTTAAGGACCAAAAACCGATCGCTTTACACA

Full Affymetrix probeset data:

Annotations for 1625600_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720