FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625638_a_at:

>probe:Drosophila_2:1625638_a_at:76:635; Interrogation_Position=1935; Antisense; TCGCCTGTCGCGAAGACATACTCAA
>probe:Drosophila_2:1625638_a_at:105:353; Interrogation_Position=2025; Antisense; GCAGCTGGAGCAGTCCTAAGAGATA
>probe:Drosophila_2:1625638_a_at:85:659; Interrogation_Position=2041; Antisense; TAAGAGATACAGCAACACACCCACA
>probe:Drosophila_2:1625638_a_at:538:423; Interrogation_Position=2091; Antisense; GAGAAATACCTAGTAAACGGCCACG
>probe:Drosophila_2:1625638_a_at:144:197; Interrogation_Position=2106; Antisense; AACGGCCACGGTGGCGTATGCGTAA
>probe:Drosophila_2:1625638_a_at:357:485; Interrogation_Position=2139; Antisense; GTAGAGCCACGCTAACTCACAAAAG
>probe:Drosophila_2:1625638_a_at:468:183; Interrogation_Position=2159; Antisense; AAAAGCCCTATAGCCAAACGATATG
>probe:Drosophila_2:1625638_a_at:132:229; Interrogation_Position=2188; Antisense; AATGAAGCTGCCACGACGAAAAGTA
>probe:Drosophila_2:1625638_a_at:280:63; Interrogation_Position=2238; Antisense; ATGTGCATACGTAGGGCATTTGTGA
>probe:Drosophila_2:1625638_a_at:193:273; Interrogation_Position=2254; Antisense; CATTTGTGAGTTGGCGCGACTTGGC
>probe:Drosophila_2:1625638_a_at:696:575; Interrogation_Position=2266; Antisense; GGCGCGACTTGGCTTTAGTATTTTA
>probe:Drosophila_2:1625638_a_at:156:541; Interrogation_Position=2306; Antisense; GGTTTTTCACTACAAACACAAGCGT
>probe:Drosophila_2:1625638_a_at:409:375; Interrogation_Position=2357; Antisense; GAAGATCTGTGGCATTCTATCTCTT
>probe:Drosophila_2:1625638_a_at:150:715; Interrogation_Position=2371; Antisense; TTCTATCTCTTTCTCTCCTAGTAAA

Paste this into a BLAST search page for me
TCGCCTGTCGCGAAGACATACTCAAGCAGCTGGAGCAGTCCTAAGAGATATAAGAGATACAGCAACACACCCACAGAGAAATACCTAGTAAACGGCCACGAACGGCCACGGTGGCGTATGCGTAAGTAGAGCCACGCTAACTCACAAAAGAAAAGCCCTATAGCCAAACGATATGAATGAAGCTGCCACGACGAAAAGTAATGTGCATACGTAGGGCATTTGTGACATTTGTGAGTTGGCGCGACTTGGCGGCGCGACTTGGCTTTAGTATTTTAGGTTTTTCACTACAAACACAAGCGTGAAGATCTGTGGCATTCTATCTCTTTTCTATCTCTTTCTCTCCTAGTAAA

Full Affymetrix probeset data:

Annotations for 1625638_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720