FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625719_at:

>probe:Drosophila_2:1625719_at:240:191; Interrogation_Position=4562; Antisense; AACTTGTGTGTGTAAACGCAGCTTA
>probe:Drosophila_2:1625719_at:666:297; Interrogation_Position=4578; Antisense; CGCAGCTTAGCGCAGAAGAACGAAA
>probe:Drosophila_2:1625719_at:413:551; Interrogation_Position=4710; Antisense; GGAGCTATACAACAATACACCAAAA
>probe:Drosophila_2:1625719_at:369:395; Interrogation_Position=4755; Antisense; GAAATCGACCGATCTGCACTTGGCA
>probe:Drosophila_2:1625719_at:386:559; Interrogation_Position=4776; Antisense; GGCACTACGCCGAGTTCCGGATAAA
>probe:Drosophila_2:1625719_at:388:541; Interrogation_Position=4794; Antisense; GGATAAAGGTCTCCGAGCAATGTTT
>probe:Drosophila_2:1625719_at:639:109; Interrogation_Position=4809; Antisense; AGCAATGTTTGGAGACCTGCCGGTC
>probe:Drosophila_2:1625719_at:21:413; Interrogation_Position=4822; Antisense; GACCTGCCGGTCTAGAATTTGTTAA
>probe:Drosophila_2:1625719_at:717:619; Interrogation_Position=4915; Antisense; TGCTTTGTGTGCATTTAAGCCCAAA
>probe:Drosophila_2:1625719_at:216:659; Interrogation_Position=4930; Antisense; TAAGCCCAAAAGAACCGATGCCGAG
>probe:Drosophila_2:1625719_at:654:317; Interrogation_Position=4949; Antisense; GCCGAGATTCGGTGGGATTAAGTCC
>probe:Drosophila_2:1625719_at:468:301; Interrogation_Position=4973; Antisense; CCCCGATGTCGATATCGAGATTCAG
>probe:Drosophila_2:1625719_at:461:455; Interrogation_Position=4997; Antisense; GATACAGATACCATTACCGATACCT
>probe:Drosophila_2:1625719_at:35:13; Interrogation_Position=5009; Antisense; ATTACCGATACCTAGGCCCAGAAGG

Paste this into a BLAST search page for me
AACTTGTGTGTGTAAACGCAGCTTACGCAGCTTAGCGCAGAAGAACGAAAGGAGCTATACAACAATACACCAAAAGAAATCGACCGATCTGCACTTGGCAGGCACTACGCCGAGTTCCGGATAAAGGATAAAGGTCTCCGAGCAATGTTTAGCAATGTTTGGAGACCTGCCGGTCGACCTGCCGGTCTAGAATTTGTTAATGCTTTGTGTGCATTTAAGCCCAAATAAGCCCAAAAGAACCGATGCCGAGGCCGAGATTCGGTGGGATTAAGTCCCCCCGATGTCGATATCGAGATTCAGGATACAGATACCATTACCGATACCTATTACCGATACCTAGGCCCAGAAGG

Full Affymetrix probeset data:

Annotations for 1625719_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720