FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625810_s_at:

>probe:Drosophila_2:1625810_s_at:578:41; Interrogation_Position=1010; Antisense; ATCGTTTCCGGAATTCGTGCACTGG
>probe:Drosophila_2:1625810_s_at:450:617; Interrogation_Position=1027; Antisense; TGCACTGGCTGCTCGACCAGGTGAA
>probe:Drosophila_2:1625810_s_at:559:711; Interrogation_Position=1062; Antisense; TTCATCGACATGCACTTCGTGGCGG
>probe:Drosophila_2:1625810_s_at:566:627; Interrogation_Position=1107; Antisense; TGCCTCATCCGGTTCGACATGATAC
>probe:Drosophila_2:1625810_s_at:454:669; Interrogation_Position=1129; Antisense; TACTGAAGTTCGAATCGCTGGCGGA
>probe:Drosophila_2:1625810_s_at:182:183; Interrogation_Position=1174; Antisense; AAAAGACTGGCCTCAAGCGGGTGAT
>probe:Drosophila_2:1625810_s_at:531:361; Interrogation_Position=1222; Antisense; GCAAGGGCCGCAAGACGCACGAGCT
>probe:Drosophila_2:1625810_s_at:291:683; Interrogation_Position=1260; Antisense; TATGCGCAGCTGACACGCCAGGAAA
>probe:Drosophila_2:1625810_s_at:686:51; Interrogation_Position=1284; Antisense; ATGCTGGAGCTCTACGAGTATTACA
>probe:Drosophila_2:1625810_s_at:94:403; Interrogation_Position=1314; Antisense; GACTTCGAGCTGTTCGACTACGATA
>probe:Drosophila_2:1625810_s_at:117:77; Interrogation_Position=1342; Antisense; AGGAGTATCTGCAGGTTGCCCGGCC
>probe:Drosophila_2:1625810_s_at:703:295; Interrogation_Position=1454; Antisense; CGAACTCACATATTAGCCGTCACAG
>probe:Drosophila_2:1625810_s_at:158:117; Interrogation_Position=945; Antisense; AGCATTGTGCGCAACTACCGCAAGA
>probe:Drosophila_2:1625810_s_at:646:577; Interrogation_Position=992; Antisense; GGCCAACACAAAGTTCCCATCGTTT

Paste this into a BLAST search page for me
ATCGTTTCCGGAATTCGTGCACTGGTGCACTGGCTGCTCGACCAGGTGAATTCATCGACATGCACTTCGTGGCGGTGCCTCATCCGGTTCGACATGATACTACTGAAGTTCGAATCGCTGGCGGAAAAAGACTGGCCTCAAGCGGGTGATGCAAGGGCCGCAAGACGCACGAGCTTATGCGCAGCTGACACGCCAGGAAAATGCTGGAGCTCTACGAGTATTACAGACTTCGAGCTGTTCGACTACGATAAGGAGTATCTGCAGGTTGCCCGGCCCGAACTCACATATTAGCCGTCACAGAGCATTGTGCGCAACTACCGCAAGAGGCCAACACAAAGTTCCCATCGTTT

Full Affymetrix probeset data:

Annotations for 1625810_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720