FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625830_a_at:

>probe:Drosophila_2:1625830_a_at:2:699; Interrogation_Position=2402; Antisense; TTTTTATACTTGTGTTTCCTATGCG
>probe:Drosophila_2:1625830_a_at:587:253; Interrogation_Position=2476; Antisense; CAACAGCCAGATACAAGCCATGCGT
>probe:Drosophila_2:1625830_a_at:285:315; Interrogation_Position=2492; Antisense; GCCATGCGTATGTATTCTAAACTTC
>probe:Drosophila_2:1625830_a_at:323:713; Interrogation_Position=2514; Antisense; TTCAGCTTACAGATCAGCCAGCGCA
>probe:Drosophila_2:1625830_a_at:622:271; Interrogation_Position=2576; Antisense; CTATAAATCTTTTACCTGGTCCTCA
>probe:Drosophila_2:1625830_a_at:201:285; Interrogation_Position=2591; Antisense; CTGGTCCTCAAATCTTACTTGCTAT
>probe:Drosophila_2:1625830_a_at:52:619; Interrogation_Position=2610; Antisense; TGCTATATCGAAACACGGCCCTGAT
>probe:Drosophila_2:1625830_a_at:220:577; Interrogation_Position=2626; Antisense; GGCCCTGATATAATGTTTCACCCTC
>probe:Drosophila_2:1625830_a_at:510:57; Interrogation_Position=2638; Antisense; ATGTTTCACCCTCATTAAATCCAAC
>probe:Drosophila_2:1625830_a_at:266:153; Interrogation_Position=2753; Antisense; ACATCCCCGATGTATTTTTGTCAAA
>probe:Drosophila_2:1625830_a_at:259:243; Interrogation_Position=2830; Antisense; AATATTGCGATATCATGTACCATGC
>probe:Drosophila_2:1625830_a_at:432:601; Interrogation_Position=2845; Antisense; TGTACCATGCAGTACGTAGGCTACT
>probe:Drosophila_2:1625830_a_at:576:289; Interrogation_Position=2885; Antisense; GAACGTTGGTTTGCTCGGTTTACAT
>probe:Drosophila_2:1625830_a_at:298:337; Interrogation_Position=2897; Antisense; GCTCGGTTTACATTACCCAAGACTA

Paste this into a BLAST search page for me
TTTTTATACTTGTGTTTCCTATGCGCAACAGCCAGATACAAGCCATGCGTGCCATGCGTATGTATTCTAAACTTCTTCAGCTTACAGATCAGCCAGCGCACTATAAATCTTTTACCTGGTCCTCACTGGTCCTCAAATCTTACTTGCTATTGCTATATCGAAACACGGCCCTGATGGCCCTGATATAATGTTTCACCCTCATGTTTCACCCTCATTAAATCCAACACATCCCCGATGTATTTTTGTCAAAAATATTGCGATATCATGTACCATGCTGTACCATGCAGTACGTAGGCTACTGAACGTTGGTTTGCTCGGTTTACATGCTCGGTTTACATTACCCAAGACTA

Full Affymetrix probeset data:

Annotations for 1625830_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720