FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625843_s_at:

>probe:Drosophila_2:1625843_s_at:634:459; Interrogation_Position=5512; Antisense; GATTTTACAGTTTTCGTCACGAGGC
>probe:Drosophila_2:1625843_s_at:674:491; Interrogation_Position=5527; Antisense; GTCACGAGGCCGGAGTTATTACCAA
>probe:Drosophila_2:1625843_s_at:40:443; Interrogation_Position=5556; Antisense; GATGTGACCAATCCGCACCAGGTTG
>probe:Drosophila_2:1625843_s_at:466:51; Interrogation_Position=5635; Antisense; ATGCGACCCAGGAATGTGGCTGCCA
>probe:Drosophila_2:1625843_s_at:487:355; Interrogation_Position=5667; Antisense; GCACTTGCTCATCCCGAATTGAAGG
>probe:Drosophila_2:1625843_s_at:205:503; Interrogation_Position=5711; Antisense; GTCGCCCAGTCTCTACTATTATGAT
>probe:Drosophila_2:1625843_s_at:225:689; Interrogation_Position=5727; Antisense; TATTATGATCCCAACCAATTGCCGC
>probe:Drosophila_2:1625843_s_at:357:353; Interrogation_Position=5765; Antisense; GCAGCCGTGCTAGTCATGAATCATA
>probe:Drosophila_2:1625843_s_at:159:685; Interrogation_Position=5809; Antisense; TATCGTCGGATATCACCGTTATCGG
>probe:Drosophila_2:1625843_s_at:58:283; Interrogation_Position=5851; Antisense; CTCCCTCACTTTTTAGCTTGTACAT
>probe:Drosophila_2:1625843_s_at:101:41; Interrogation_Position=5935; Antisense; ATCGTCTGTACGTAGTGCTTTGCAT
>probe:Drosophila_2:1625843_s_at:367:207; Interrogation_Position=6020; Antisense; AAGCAGGTGGCTTCATTCCGATGGC
>probe:Drosophila_2:1625843_s_at:701:9; Interrogation_Position=6034; Antisense; ATTCCGATGGCACGTTTGAGTTCAC
>probe:Drosophila_2:1625843_s_at:210:473; Interrogation_Position=6053; Antisense; GTTCACCAACACCAAATTCACTTTA

Paste this into a BLAST search page for me
GATTTTACAGTTTTCGTCACGAGGCGTCACGAGGCCGGAGTTATTACCAAGATGTGACCAATCCGCACCAGGTTGATGCGACCCAGGAATGTGGCTGCCAGCACTTGCTCATCCCGAATTGAAGGGTCGCCCAGTCTCTACTATTATGATTATTATGATCCCAACCAATTGCCGCGCAGCCGTGCTAGTCATGAATCATATATCGTCGGATATCACCGTTATCGGCTCCCTCACTTTTTAGCTTGTACATATCGTCTGTACGTAGTGCTTTGCATAAGCAGGTGGCTTCATTCCGATGGCATTCCGATGGCACGTTTGAGTTCACGTTCACCAACACCAAATTCACTTTA

Full Affymetrix probeset data:

Annotations for 1625843_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720