FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625851_s_at:

>probe:Drosophila_2:1625851_s_at:35:97; Interrogation_Position=2655; Antisense; AGATATCACCACCAAGTTGCTGCTG
>probe:Drosophila_2:1625851_s_at:235:45; Interrogation_Position=2705; Antisense; ATCCCGTTGCCAATGTTCGTTTCAA
>probe:Drosophila_2:1625851_s_at:10:639; Interrogation_Position=2721; Antisense; TCGTTTCAACGTGGCAAAGACCCTG
>probe:Drosophila_2:1625851_s_at:432:213; Interrogation_Position=2737; Antisense; AAGACCCTGCAGAAGATCTCGCCCT
>probe:Drosophila_2:1625851_s_at:31:549; Interrogation_Position=2766; Antisense; GGAGGCCAGCGTCATTGATGCCCAA
>probe:Drosophila_2:1625851_s_at:77:727; Interrogation_Position=2780; Antisense; TTGATGCCCAAGTAAAGCCCACACT
>probe:Drosophila_2:1625851_s_at:483:663; Interrogation_Position=2792; Antisense; TAAAGCCCACACTCGACAAACTGAA
>probe:Drosophila_2:1625851_s_at:558:207; Interrogation_Position=2839; Antisense; AAGCATTTTGCTGCACAGGCCATTG
>probe:Drosophila_2:1625851_s_at:291:9; Interrogation_Position=2860; Antisense; ATTGCCGGCATAGCTGCAGCGTAAT
>probe:Drosophila_2:1625851_s_at:435:119; Interrogation_Position=2877; Antisense; AGCGTAATCAACCTTCTTGCATCTT
>probe:Drosophila_2:1625851_s_at:125:195; Interrogation_Position=2920; Antisense; AACTGTATGTATTTAACGCCGGCAA
>probe:Drosophila_2:1625851_s_at:38:375; Interrogation_Position=2993; Antisense; GATCCCGGAAGGTGTTAAACGCTGC
>probe:Drosophila_2:1625851_s_at:159:709; Interrogation_Position=3007; Antisense; TTAAACGCTGCAGCCGATGCTGGAT
>probe:Drosophila_2:1625851_s_at:359:481; Interrogation_Position=3195; Antisense; GTTTGGAACATTTGATCGCATCTGA

Paste this into a BLAST search page for me
AGATATCACCACCAAGTTGCTGCTGATCCCGTTGCCAATGTTCGTTTCAATCGTTTCAACGTGGCAAAGACCCTGAAGACCCTGCAGAAGATCTCGCCCTGGAGGCCAGCGTCATTGATGCCCAATTGATGCCCAAGTAAAGCCCACACTTAAAGCCCACACTCGACAAACTGAAAAGCATTTTGCTGCACAGGCCATTGATTGCCGGCATAGCTGCAGCGTAATAGCGTAATCAACCTTCTTGCATCTTAACTGTATGTATTTAACGCCGGCAAGATCCCGGAAGGTGTTAAACGCTGCTTAAACGCTGCAGCCGATGCTGGATGTTTGGAACATTTGATCGCATCTGA

Full Affymetrix probeset data:

Annotations for 1625851_s_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720