FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

looking for 1625888_a_at:

>probe:Drosophila_2:1625888_a_at:100:339; Interrogation_Position=4135; Antisense; GCTCGGGTCACAAGCAGCTGGACAT
>probe:Drosophila_2:1625888_a_at:146:559; Interrogation_Position=4154; Antisense; GGACATTTCCATAATGGCCTACGAG
>probe:Drosophila_2:1625888_a_at:715:557; Interrogation_Position=4184; Antisense; GGAACTGGTCTACAACCTGTATCCG
>probe:Drosophila_2:1625888_a_at:686:483; Interrogation_Position=4202; Antisense; GTATCCGCTGCAAGTGGGCTGGCAA
>probe:Drosophila_2:1625888_a_at:68:361; Interrogation_Position=4223; Antisense; GCAAGAGTTGCCAGTGCTGAGTCTG
>probe:Drosophila_2:1625888_a_at:331:241; Interrogation_Position=4254; Antisense; AATACCAAGGCCGATCCGCAGAAGA
>probe:Drosophila_2:1625888_a_at:488:263; Interrogation_Position=4287; Antisense; CAGAATGCCTTGCTCGACGAATTGG
>probe:Drosophila_2:1625888_a_at:98:617; Interrogation_Position=4319; Antisense; TGCACTGCCCAAACGAGTCTTTGTG
>probe:Drosophila_2:1625888_a_at:403:621; Interrogation_Position=4342; Antisense; TGCTGCCACCTCTGAAGCAACAGAA
>probe:Drosophila_2:1625888_a_at:627:443; Interrogation_Position=4375; Antisense; GATGATACTGATATAATGCCGCTTT
>probe:Drosophila_2:1625888_a_at:344:661; Interrogation_Position=4460; Antisense; TACTCCCTCTTTATTGCTAACAACA
>probe:Drosophila_2:1625888_a_at:543:577; Interrogation_Position=4577; Antisense; TGGGCCAAGACGCACTAGACATTAT
>probe:Drosophila_2:1625888_a_at:601:657; Interrogation_Position=4637; Antisense; TAAGTCCTGGTCAGTACCGCAAGTT
>probe:Drosophila_2:1625888_a_at:218:469; Interrogation_Position=4659; Antisense; GTTGCACATATTTTCGTACATCCTT

Paste this into a BLAST search page for me
GCTCGGGTCACAAGCAGCTGGACATGGACATTTCCATAATGGCCTACGAGGGAACTGGTCTACAACCTGTATCCGGTATCCGCTGCAAGTGGGCTGGCAAGCAAGAGTTGCCAGTGCTGAGTCTGAATACCAAGGCCGATCCGCAGAAGACAGAATGCCTTGCTCGACGAATTGGTGCACTGCCCAAACGAGTCTTTGTGTGCTGCCACCTCTGAAGCAACAGAAGATGATACTGATATAATGCCGCTTTTACTCCCTCTTTATTGCTAACAACATGGGCCAAGACGCACTAGACATTATTAAGTCCTGGTCAGTACCGCAAGTTGTTGCACATATTTTCGTACATCCTT

Full Affymetrix probeset data:

Annotations for 1625888_a_at in Drosophila_2.na32.annot.csv

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720